RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CDH5P33151 784 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 RPL34P49207 117 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ATXN1P54253 815 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 YWHAZP63104 245 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 PFKPQ01813 784 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 KDSRQ06136 332 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 RUNX3Q13761 415 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 MEA1Q16626 185 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CDO1Q16878 200 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CLEC16AQ2KHT3 1053 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ANO4Q32M45 955 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ITPRIPL2Q3MIP1 535 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 RAB6CQ53S08 254 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 LY6G5CQ5SRR4 150 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TRNP1Q6NT89 227 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TOGARAM2Q6ZUX3 1019 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 C12orf40Q86WS4 652 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 STK32AQ8WU08 396 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 E2F7Q96AV8 911 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ERLEC1Q96DZ1 483 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 LRFN3Q9BTN0 628 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 RAB6CQ9H0N0 254 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ECT2Q9H8V3 914 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 POPDC2Q9HBU9 364 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 FBRSL1Q9HCM7 1045 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 OBP2AQ9NY56 170 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CALCOCO1Q9P1Z2 691 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 NEDD8-MDP1E9PL57 170 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 GREM1O60565 184 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TSPAN3O60637 253 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TRUB2O95900 331 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 UNGP13051 313 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 GLULP15104 373 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ABCB4P21439 1286 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TNFAIP3P21580 790 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 GJA4P35212 333 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ZBED6P86452 979 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 SLC6A3Q01959 620 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CENPCQ03188 943 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 HGSNATQ68CP4 663 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 RFWD3Q6PCD5 774 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 Q6ZS52 159 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ZNF677Q86XU0 584 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TMEM25Q86YD3 366 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 JOSD2Q8TAC2 188 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 DNASE1L2Q92874 299 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ATP2A3Q93084 1043 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CFAP57Q96MR6 1250 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 DDIT4Q9NX09 232 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ADAM22Q9P0K1 906 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 WNT16Q9UBV4 365 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 LSM7Q9UK45 103 aaKnown RBP7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 CAPN11Q9UMQ6 739 aa7.56□□□□□ -1.2
DEPDC1B-201ENST00000265036 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.25e-16■■■■■ 40.3
DEPDC1B-201ENST00000265036 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 HSF2BPO75031 334 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 MMP8P22894 467 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 RRM1P23921 792 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 HOXC13P31276 330 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 ATP11AP98196 1134 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 DHCR24Q15392 516 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 C15orf59Q2T9L4 293 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 ZC3H12AQ5D1E8 599 aaKnown RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 FIGNQ5HY92 759 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 OTUD1Q5VV17 481 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 RHBDF2Q6PJF5 856 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 TADA2BQ86TJ2 420 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SUGP1Q8IWZ8 645 aaKnown RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 CPA6Q8N4T0 437 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 TMEM105Q8N8V8 129 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SPC24Q8NBT2 197 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 IRGQQ8WZA9 623 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SYT11Q9BT88 431 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 NUP58Q9BVL2 599 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 POLR3BQ9NW08 1133 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 ARHGAP20Q9P2F6 1191 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 ITIH6Q6UXX5 1313 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 PIEZO1Q92508 2521 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 KIAA1549LQ6ZVL6 1849 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 GOLGA6L7A0A1B0GV03 622 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 A0A1W2PQJ5 194 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 M0QYT0 321 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 IRAK2O43187 625 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 MFAP3LO75121 409 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 NFATC1O95644 943 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SLC6A11P48066 632 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SULT1E1P49888 294 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SGSHP51688 502 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 ZNF75DP51815 510 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 TBX4P57082 545 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 COG7P83436 770 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 PDGFRLQ15198 375 aa7.55□□□□□ -1.2
DEPDC1B-201ENST00000265036 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms