RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 ITGA7Q13683 1181 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 SYPL2Q5VXT5 272 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 LINC01465Q8N7H1 131 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 PAF1Q8N7H5 531 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 UBR7Q8N806 425 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 TTC13Q8NBP0 860 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 DNALI1O14645 258 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 PTGESO14684 152 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 GPR182O15218 404 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 HEATR6Q6AI08 1181 aaKnown RBP13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 LVRNQ6Q4G3 990 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 LCTP09848 1927 aa13.96□□□□□ -0.17
TNFRSF8-201ENST00000263932 SCAMP3O14828 347 aaKnown RBP13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 KLF1Q13351 362 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 BMPR2Q13873 1038 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 CES3Q6UWW8 571 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 DEFB128Q7Z7B8 93 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 ALLCQ8N6M5 410 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 CAPNS2Q96L46 248 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 YIPF3Q9GZM5 350 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 ACTR5Q9H9F9 607 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 ARMCX1Q9P291 453 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.18
TNFRSF8-201ENST00000263932 TMEM88BA6NKF7 163 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ENO4A6NNW6 628 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PQBP1O60828 265 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ANP32DO95626 131 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PFKMP08237 780 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 SLC10A3P09131 477 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 UBXN11Q5T124 520 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ANKRD20A3Q5VUR7 823 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 TRMT10CQ7L0Y3 403 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 RNF180Q86T96 592 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 AGAP11Q8TF27 550 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ETNK2Q9NVF9 386 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 KIAA1257Q9ULG3 409 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 KRT16P08779 473 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ATP2A2P16615 1042 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 YWHAZP63104 245 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 TAF11Q15544 211 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 DEFB115Q30KQ5 88 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 BOLA3Q53S33 107 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 TMEM209Q96SK2 561 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 IL1RAPL1Q9NZN1 696 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 EME2A4GXA9 379 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 SEPT4O43236 478 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ATP5DP30049 168 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 ALDH3A1P30838 453 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 RPA3P35244 121 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 GCKP35557 465 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PNPLA4P41247 253 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 INHBEP58166 350 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 DPYSL3Q14195 570 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 STILQ15468 1287 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 KCNT2Q6UVM3 1135 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 LRRC52Q8N7C0 313 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 DNAAF3Q8N9W5 541 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 C3orf58Q8NDZ4 430 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 KBTBD7Q8WVZ9 684 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 MCRS1Q96EZ8 462 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PCED1BQ96HM7 432 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 STARD7Q9NQZ5 370 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 GEMIN8Q9NWZ8 242 aaKnown RBP13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 PARP14Q460N5 1801 aa13.95□□□□□ -0.18
TNFRSF8-201ENST00000263932 CPP00450 1065 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 ELK3P41970 407 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 ABCG1P45844 678 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 ELF3P78545 371 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 KDSRQ06136 332 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 FNBP1LQ5T0N5 605 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 RNF157Q96PX1 679 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 LRRC37BQ96QE4 947 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 CEP290O15078 2479 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 SOAT2O75908 522 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 ITGB1P05556 798 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 INHBAP08476 426 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 NPR3P17342 541 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 DRG2P55039 364 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 CCL23P55773 120 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 HDAC4P56524 1084 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 BBS12Q6ZW61 710 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 SCAMP5Q8TAC9 235 aa13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 UNKQ9C0B0 810 aaKnown RBP13.94□□□□□ -0.18
TNFRSF8-201ENST00000263932 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms