RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TPBGLP0DKB5 382 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 MX2P20592 715 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 NUDT2P50583 147 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 XRRA1Q6P2D8 792 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ST13P4Q8IZP2 240 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 PDGFCQ9NRA1 345 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 SNTG2Q9NY99 539 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 TRUB2O95900 331 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 KLF1Q13351 362 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ACSBG2Q5FVE4 666 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 WDR60Q8WVS4 1066 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 BOLA3Q53S33 107 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 C7orf43Q8WVR3 580 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 PIWIL1Q96J94 861 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 MAGEB5Q9BZ81 275 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ELOVL4Q9GZR5 314 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 PAPOLBQ9NRJ5 636 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 TAS2R1Q9NYW7 299 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 EP400Q96L91 3159 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 AP1G2O75843 785 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 PPM1JQ5JR12 505 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 COLGALT1Q8NBJ5 622 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 RBM15BQ8NDT2 890 aaKnown RBP16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC7A14Q8TBB6 771 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 INPP5DQ92835 1189 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 EBF4Q9BQW3 602 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 C20orf96Q9NUD7 363 aaPredicted RBP16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 ETNK2Q9NVF9 386 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 PLA2G4CQ9UP65 541 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 SPATA31C2B4DYI2 1134 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 DFFAO00273 331 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 HUS1O60921 280 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 USP4Q13107 963 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC12A1Q13621 1099 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 CA9Q16790 459 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 WASHC2DQ5SRD0 308 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 FBXL18Q96ME1 805 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
PDZRN3-201ENST00000263666 M0QYT0 321 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 CRCPO75575 148 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 COPAP53621 1224 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 MED21Q13503 144 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 EXOC8Q8IYI6 725 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 AFG1LQ8WV93 481 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 KLRG1Q96E93 195 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 L3MBTL3Q96JM7 780 aaPredicted RBP16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 NTPCRQ9BSD7 190 aaKnown RBP16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 ATXN3LQ9H3M9 355 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 SMARCAD1Q9H4L7 1026 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 C2CD2Q9Y426 696 aa16.71■□□□□ 0.26
PDZRN3-201ENST00000263666 CLGNO14967 610 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 RGS20O76081 388 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 APOEP02649 317 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 VDRP11473 427 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 HSP90AA5PQ58FG0 334 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 EFHC2Q5JST6 749 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 IYDQ6PHW0 289 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 METTL7BQ6UX53 244 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 SPATA6LQ8N4H0 392 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 CELF6Q96J87 481 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 HCRTO43612 131 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 RPS6KA2Q15349 733 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 NMD3Q96D46 503 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 CYP4F12Q9HCS2 524 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 PNPOQ9NVS9 261 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 PKNOX1P55347 436 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 PCSK7Q16549 785 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 RNF157Q96PX1 679 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
PDZRN3-201ENST00000263666 GPR25O00155 361 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TPP1O14773 563 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PRPF4O43172 522 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 ZNF252P-AS1Q0IIN9 211 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 USP10Q14694 798 aaKnown RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 ZPBP2Q6X784 338 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 XYLT1Q86Y38 959 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 PYROXD2Q8N2H3 581 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 MPP5Q8N3R9 675 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 NKD2Q969F2 451 aaPredicted RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 IL1RL2Q9HB29 575 aa16.69■□□□□ 0.26
PDZRN3-201ENST00000263666 TAGLN3Q9UI15 199 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms