RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 TP73O15350 636 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 MED26O95402 600 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 RPN2P04844 631 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 GCLCP48506 637 aaPredicted RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 OXCT1P55809 520 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 RHOAP61586 193 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 CLYBLQ8N0X4 340 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 MTIF3Q9H2K0 278 aaKnown RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 EXO5Q9H790 373 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 SPAG6O75602 509 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 CLUP10909 449 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 VCLP18206 1134 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 PLK1P53350 603 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 RNASE12Q5GAN4 147 aaKnown RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 NOL9Q5SY16 702 aaKnown RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 ZCCHC8Q6NZY4 707 aaKnown RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 POP1Q99575 1024 aaKnown RBP12.78□□□□□ -0.36
ARFGEF1-201ENST00000262215 AP3D1O14617 1153 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 EPS8L2Q9H6S3 715 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 KLHL28Q9NXS3 571 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 WBP11Q9Y2W2 641 aaKnown RBP12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 PPP2R1BP30154 601 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 USP49Q70CQ1 688 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 LRRC6Q86X45 466 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 CYP4X1Q8N118 509 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 LRRN4CLQ8ND94 238 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 LPCAT1Q8NF37 534 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 SLITRK2Q9H156 845 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 ARMC7Q9H6L4 198 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 CMTM6Q9NX76 183 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 SEC22BO75396 215 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 PDHA2P29803 388 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 MADCAM1Q13477 382 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 MICALL2Q8IY33 904 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 ATXN3LQ9H3M9 355 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.36
ARFGEF1-201ENST00000262215 CPDO75976 1380 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 SLC12A8A0AV02 714 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 HK2P52789 917 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 NRF1Q16656 503 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 ZNF621Q6ZSS3 439 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 BBS4Q96RK4 519 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 MTMR12Q9C0I1 747 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 EFCAB10A6NFE3 127 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 IRAK1BP1Q5VVH5 260 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 LRRC74BQ6ZQY2 392 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 ANAPC2Q9UJX6 822 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 F8VZ95 297 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 BTN3A3O00478 584 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 IFNA14P01570 189 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 C21orf59P57076 290 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 KRT74Q7RTS7 529 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 EID3Q8N140 333 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 CCDC185Q8N715 623 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 EMC1Q8N766 993 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 MBD2Q9UBB5 411 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 SHOC2Q9UQ13 582 aa12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
ARFGEF1-201ENST00000262215 UBDO15205 165 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 GLP2RO95838 553 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 FAM58BPP0C7Q3 252 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 MYL4P12829 197 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 BIKQ13323 160 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 SCARF1Q14162 830 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 TSNQ15631 228 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 FAM98BQ52LJ0 330 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 ATG14Q6ZNE5 492 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 PAFAH2Q99487 392 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 TAGLN3Q9UI15 199 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 SDR42E2A6NKP2 422 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 TIMM44O43615 452 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 SSNA1O43805 119 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 FASP25445 335 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 DPYDQ12882 1025 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 CENPIQ92674 756 aaPredicted RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 RORBQ92753 470 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 MARK4Q96L34 752 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 VCPKMTQ9H867 229 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
ARFGEF1-201ENST00000262215 IFRD1O00458 451 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms