RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 NIPA2Q8N8Q9 360 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 ARL14EPQ8N8R7 260 aaPredicted RBP16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 SLC46A2Q9BY10 475 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 CD207Q9UJ71 328 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
CCDC90B-201ENST00000260054 MSI1O43347 362 aaKnown RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 PROSCO94903 275 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 KCNA5P22460 613 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 FSHRP23945 695 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 ATP5C1P36542 298 aaKnown RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 EIF4EBP2Q13542 120 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 PIGHQ14442 188 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 ARHGAP15Q53QZ3 475 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 TADA2BQ86TJ2 420 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 MIB1Q86YT6 1006 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 LRRC57Q8N9N7 239 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 FAM172AQ8WUF8 416 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 CENPIQ92674 756 aaPredicted RBP16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 NACA2Q9H009 215 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 FAM204AQ9H8W3 233 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 RRN3Q9NYV6 651 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 MARCH2Q9P0N8 246 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 DNMT3LQ9UJW3 386 aa16.48■□□□□ 0.23
CCDC90B-201ENST00000260054 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 GOLGA6L9A6NEM1 432 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 IRAK2O43187 625 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 PALMO75781 387 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 ENDOD1O94919 500 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 HDCP19113 662 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 HDAC4P56524 1084 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 NME3Q13232 169 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 IFI16Q16666 785 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 C11orf63Q6NUN7 778 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 DAAM2Q86T65 1068 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 PGAP3Q96FM1 320 aaPredicted RBP16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 CALR3Q96L12 384 aaKnown RBP16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 RIPOR3Q96MK2 946 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 ZSWIM3Q96MP5 696 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 TASP1Q9H6P5 420 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 PIGVQ9NUD9 493 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 DDIT4Q9NX09 232 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
CCDC90B-201ENST00000260054 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 LRCH4O75427 683 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 TCF4P15884 667 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 DDX6P26196 483 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 MAN1A1P33908 653 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 DEUP1Q05D60 604 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 GET4Q7L5D6 327 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 NPAS3Q8IXF0 933 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SUSD6Q92537 303 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 ZFRQ96KR1 1074 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SERPINB11Q96P15 392 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 POMKQ9H5K3 350 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SLITRK6Q9H5Y7 841 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 LCMT1Q9UIC8 334 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 USP15Q9Y4E8 981 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 ALG6Q9Y672 507 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SLC12A8A0AV02 714 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 CKMP06732 381 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 MBL2P11226 248 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 PFKLP17858 780 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 COMTP21964 271 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 MTHFRP42898 656 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 ZXDBP98169 803 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 ACAP1Q15027 740 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SLFN11Q7Z7L1 901 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 CMTM8Q8IZV2 173 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 FGF13Q92913 245 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 HLA-CQ95604 372 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SMG9Q9H0W8 520 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 SMPD4Q9NXE4 827 aa16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC90B-201ENST00000260054 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 RNF8O76064 485 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 DESP17661 470 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 GBP1P32455 592 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC7A9P82251 487 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 NNTQ13423 1086 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 TRIP4Q15650 581 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 SLC39A13Q96H72 371 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 KLF16Q9BXK1 252 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 GKN1Q9NS71 199 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 TLR6Q9Y2C9 796 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 CPQQ9Y646 472 aa16.45■□□□□ 0.22
CCDC90B-201ENST00000260054 F9P00740 461 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 IGLV3-27P01718 113 aa16.44■□□□□ 0.22
CCDC90B-201ENST00000260054 HMBSP08397 361 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms