RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 OPHN1O60890 802 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 CLDN11O75508 207 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ATP4AP20648 1035 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 SETMARQ53H47 684 aaPredicted RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 MAB21L3Q8N8X9 362 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 IPMKQ8NFU5 416 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 NID2Q14112 1375 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 TARSL2A2RTX5 802 aaKnown RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ATP9BO43861 1147 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 KCNA2P16389 499 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 PON1P27169 355 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 BLKP51451 505 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ERVK-21P61565 698 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 MLLT1Q03111 559 aaPredicted RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 DMC1Q14565 340 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 HS6ST3Q8IZP7 471 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 CEP295NLQ96MC4 621 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 VPS11Q9H270 941 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 SMG5Q9UPR3 1016 aaKnown RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 RASSF10A6NK89 507 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 MICAL2O94851 1124 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 FAM83EQ2M2I3 478 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 AGAP9Q5VTM2 703 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 LMNTD2Q8IXW0 634 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 CDC26Q8NHZ8 85 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 EMID1Q96A84 441 aaPredicted RBP13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ATP8A1Q9Y2Q0 1164 aa13.84□□□□□ -0.19
PRPF38A-201ENST00000257181 ADIGQ0VDE8 80 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 TFDP3Q5H9I0 405 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 OTOP2Q7RTS6 562 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 MYLPFQ96A32 169 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 TMEM159Q96B96 161 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 ZYG11BQ9C0D3 744 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 L3MBTL1Q9Y468 752 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 NPC1O15118 1278 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 PFKLP17858 780 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 FSHRP23945 695 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 ATL1Q8WXF7 558 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 FGD4Q96M96 766 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 TLR9Q9NR96 1032 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 CD274Q9NZQ7 290 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 SOWAHBA6NEL2 793 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 GABRR2P28476 465 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 TUBP50607 506 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 PKP1Q13835 747 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 ACOX1Q15067 660 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 HDDC3Q8N4P3 179 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 CARD9Q9H257 536 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 CASS4Q9NQ75 786 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 PIPSLA2A3N6 862 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 C5orf58C9J3I9 102 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 PROSCO94903 275 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 KREMEN2Q8NCW0 462 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC2A14Q8TDB8 520 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 EXT2Q93063 718 aa13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 SAE1Q9UBE0 346 aaPredicted RBP13.83□□□□□ -0.2
PRPF38A-201ENST00000257181 PEAK1Q9H792 1746 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 PRKAA2P54646 552 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ZC3H18Q86VM9 953 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 TMEM161BQ8NDZ6 487 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 OVCA2Q8WZ82 227 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 RETREG1Q9H6L5 497 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 TBC1D30Q9Y2I9 924 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 DCTN3O75935 186 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 C9orf57Q5W0N0 161 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 PRDM10Q9NQV6 1147 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 USP18Q9UMW8 372 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ZFP37Q9Y6Q3 630 aaPredicted RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 SRP72O76094 671 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 BDNFP23560 247 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 HNRNPH2P55795 449 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 KIAA0319LQ8IZA0 1049 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF248Q8NDW4 579 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ETNPPLQ8TBG4 499 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 OTUB2Q96DC9 234 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 PAWRQ96IZ0 340 aaKnown RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 RAB6BQ9NRW1 208 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 ATP5HO75947 161 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 OR1D2P34982 312 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 OSBPL9Q96SU4 736 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 AASDHPPTQ9NRN7 309 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
PRPF38A-201ENST00000257181 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms