RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZDHHC17Q8IUH5 632 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 NETO2Q8NC67 525 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CFAP36Q96G28 342 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 ZNF560Q96MR9 790 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 PITPNM3Q9BZ71 974 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 GDAP2Q9NXN4 497 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 SENP1Q9P0U3 644 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 PAK5Q9P286 719 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 PRKAG3Q9UGI9 489 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 AP4E1Q9UPM8 1137 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CDY2AQ9Y6F7 541 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CHADO15335 359 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 BEST1O76090 585 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 INHAP05111 366 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 KCNE1P15382 129 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 RABGGTBP53611 331 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 LILRA4P59901 499 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 YWHAZP63104 245 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 PITX1P78337 314 aaPredicted RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 RASA2Q15283 850 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 KBTBD12Q3ZCT8 623 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 SERINC5Q86VE9 423 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 CENPIQ92674 756 aaPredicted RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 RTP4Q96DX8 246 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 TMPRSS4Q9NRS4 437 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 ETNK2Q9NVF9 386 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 ARL2BPQ9Y2Y0 163 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 APRTP07741 180 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 DPYSL2Q16555 572 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 XKR4Q5GH76 650 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 TWF2Q6IBS0 349 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 PRPF39Q86UA1 669 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 RSPH3Q86UC2 560 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 FAM131BQ86XD5 332 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 TRIM56Q9BRZ2 755 aaKnown RBP19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 PPCSQ9HAB8 311 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 ETNK1Q9HBU6 452 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 THSD7BQ9C0I4 1608 aa19.4■□□□□ 0.7
PDLIM4-201ENST00000253754 SYNJ2BP-COX16A0A087WUM0 186 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 BCLAF3A2AJT9 711 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 SMAPO00193 183 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 PTGESO14684 152 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 SNX16P57768 344 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 ADIGQ0VDE8 80 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 LVRNQ6Q4G3 990 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 FITM2Q8N6M3 262 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 B3GALNT2Q8NCR0 500 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 CSPG4P5Q96PW8 444 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 COX16Q9P0S2 106 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 FETUBQ9UGM5 382 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 F5H423 210 aaPredicted RBP19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 HUS1O60921 280 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 DNAJC8O75937 253 aaPredicted RBP19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 METTL18O95568 372 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 GOT1P17174 413 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 DESP17661 470 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 ADRA1DP25100 572 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 CAND1Q86VP6 1230 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 FAM228AQ86W67 206 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 FUKQ8N0W3 1084 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 DNAJC5GQ8N7S2 189 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 CCDC63Q8NA47 563 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 FAM149B1Q96BN6 582 aa19.39■□□□□ 0.69
PDLIM4-201ENST00000253754 WDR91A4D1P6 747 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 FAM155BO75949 473 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 RPL34P49207 117 aaKnown RBP19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 NDUFV1P49821 464 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 AFF1P51825 1210 aaKnown RBP19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 ACLYP53396 1101 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 SLC18A1P54219 525 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 ARHGEF6Q15052 776 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 PDK4Q16654 411 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 SV2CQ496J9 727 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 LIMS2Q7Z4I7 341 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 DEFB106AQ8N104 65 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 ANKLE1Q8NAG6 615 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 CYTH2Q99418 400 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 PLAC1Q9HBJ0 212 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 KLC4Q9NSK0 619 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 SLC17A7Q9P2U7 560 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 PHTF1Q9UMS5 762 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
PDLIM4-201ENST00000253754 CHRNA1P02708 482 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 ATP2A2P16615 1042 aaKnown RBP19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 AMPD1P23109 780 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 GRK4P32298 578 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 PNPLA4P41247 253 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 XRCC4Q13426 336 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 ITGA7Q13683 1181 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 HHATQ5VTY9 493 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 KIAA0319Q5VV43 1072 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 WSCD1Q658N2 575 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 ECHDC2Q86YB7 292 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 PLCD3Q8N3E9 789 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 KLC2Q9H0B6 622 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 HMX1Q9NP08 348 aaPredicted RBP19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 THPOP40225 353 aa19.37■□□□□ 0.69
PDLIM4-201ENST00000253754 SULT1E1P49888 294 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms