RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 SNTG2Q9NY99 539 aa19.08■□□□□ 0.65
LRP3-201ENST00000253193 TAS2R1Q9NYW7 299 aa19.08■□□□□ 0.65
LRP3-201ENST00000253193 COL4A5P29400 1685 aa19.08■□□□□ 0.65
LRP3-201ENST00000253193 A6NHS1 94 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 MEI4A8MW99 385 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 USP2O75604 605 aaPredicted RBP19.08■□□□□ 0.64
LRP3-201ENST00000253193 ATICP31939 592 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 PID1Q7Z2X4 250 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 UNC5BQ8IZJ1 945 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 POU5F2Q8N7G0 328 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 ZNF398Q8TD17 642 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 CLPTM1LQ96KA5 538 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 ASB7Q9H672 318 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 TEX264Q9Y6I9 313 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 MCF2P10911 925 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.64
LRP3-201ENST00000253193 DCAF6Q58WW2 860 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 MPP5Q8N3R9 675 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 GSDMBQ8TAX9 411 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 MRPL45Q9BRJ2 306 aaKnown RBP19.08■□□□□ 0.64
LRP3-201ENST00000253193 SLC17A6Q9P2U8 582 aa19.08■□□□□ 0.64
LRP3-201ENST00000253193 TXNDC9O14530 226 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 SLC6A3Q01959 620 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 Q3C1V9 767 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 PLPPR4Q7Z2D5 763 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 SCG3Q8WXD2 468 aaKnown RBP19.07■□□□□ 0.64
LRP3-201ENST00000253193 SSU72Q9NP77 194 aaKnown RBP19.07■□□□□ 0.64
LRP3-201ENST00000253193 CCDC130P13994 396 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 SERPINB6P35237 376 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 LGMNQ99538 433 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 NRDE2Q9H7Z3 1164 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 SCOCQ9UIL1 159 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 LRRC42Q9Y546 428 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 WFS1O76024 890 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 CSH1P0DML2 217 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 CSH2P0DML3 217 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 NBPF20Q3BBV1 942 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 MTBPQ96DY7 904 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 IFT122Q9HBG6 1241 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 KLHL8Q9P2G9 620 aaPredicted RBP19.07■□□□□ 0.64
LRP3-201ENST00000253193 DNAJC16Q9Y2G8 782 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 PLLPQ9Y342 182 aa19.07■□□□□ 0.64
LRP3-201ENST00000253193 FAM189A1O60320 539 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 METTL18O95568 372 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 CLEC4CQ8WTT0 213 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 BCO2Q9BYV7 579 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 LYPLA1O75608 230 aaPredicted RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 TGM2P21980 687 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 IRX1P78414 480 aaPredicted RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 FASTKD1Q53R41 847 aaKnown RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 STKLD1Q8NE28 680 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 NDRG1Q92597 394 aaKnown RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 LRRC4Q9HBW1 653 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 SMYD2Q9NRG4 433 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 SPATS2LQ9NUQ6 558 aaKnown RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 KANSL3Q9P2N6 904 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 E7ESA3 106 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 HCRTO43612 131 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 AKAP5P24588 427 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 BIRC2Q13490 618 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 UBAP2LQ14157 1087 aaKnown RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 KCNJ11Q14654 390 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 PRKD1Q15139 912 aaPredicted RBP19.06■□□□□ 0.64
LRP3-201ENST00000253193 ACSBG2Q5FVE4 666 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 RNF220Q5VTB9 566 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 ILDR2Q71H61 639 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 DPP9Q86TI2 863 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 BEST2Q8NFU1 509 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.06■□□□□ 0.646e-7■■■□□ 17
LRP3-201ENST00000253193 RNF34Q969K3 372 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 DNAI2Q9GZS0 605 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 PDZD7Q9H5P4 517 aa19.06■□□□□ 0.64
LRP3-201ENST00000253193 ATP9BO43861 1147 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 SLC25A27O95847 323 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 TFE3P19532 575 aaPredicted RBP19.05■□□□□ 0.64
LRP3-201ENST00000253193 ABCG1P45844 678 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 SCUBE1Q8IWY4 988 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 NMRK1Q9NWW6 199 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 GPRC5DQ9NZD1 345 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 USP12O75317 370 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 AP1G2O75843 785 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 SULT1E1P49888 294 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 N4BP2L1Q5TBK1 243 aaPredicted RBP19.05■□□□□ 0.64
LRP3-201ENST00000253193 LCLAT1Q6UWP7 414 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 RASSF3Q86WH2 238 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 SLC26A7Q8TE54 656 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 TFB1MQ8WVM0 346 aaKnown RBP19.05■□□□□ 0.64
LRP3-201ENST00000253193 WDR60Q8WVS4 1066 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 ZCWPW1Q9H0M4 648 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 ITGA11Q9UKX5 1188 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
LRP3-201ENST00000253193 PSMG1O95456 288 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 LGALS2P05162 132 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 UBTFL6P0CB48 400 aaPredicted RBP19.05■□□□□ 0.64
LRP3-201ENST00000253193 MGAT1P26572 445 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 CCNG1P51959 295 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 RAPH1Q70E73 1250 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 PYROXD2Q8N2H3 581 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 COLGALT1Q8NBJ5 622 aa19.05■□□□□ 0.64
LRP3-201ENST00000253193 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms