RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PIGZQ86VD9 579 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 CCDC110Q8TBZ0 833 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 ZNF398Q8TD17 642 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 MAGEC3Q8TD91 643 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 SPOCK2Q92563 424 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 OLFM3Q96PB7 478 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
UBE3D-201ENST00000237186 AP5M1Q9H0R1 490 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 PLAC1Q9HBJ0 212 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 SLCO1B3Q9NPD5 702 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 FZD10Q9ULW2 581 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 KAT6AQ92794 2004 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 DAB1O75553 588 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 PIAS1O75925 651 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 APRTP07741 180 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 MYL3P08590 195 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 CCNB1P14635 433 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 TKTP29401 623 aaKnown RBP16.76■□□□□ 0.27
UBE3D-201ENST00000237186 SLC8A3P57103 927 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 FAAP100Q0VG06 881 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 RIPK1Q13546 671 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 SEMA5AQ13591 1074 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 SPDYAQ5MJ70 313 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 NCBP2-AS2Q69YL0 99 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 CYS1Q717R9 158 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 LRRC6Q86X45 466 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 CCDC185Q8N715 623 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 LENG1Q96BZ8 264 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-201ENST00000237186 ECT2Q9H8V3 914 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 GOLGA2P5Q9HBQ8 144 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 DTLQ9NZJ0 730 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 GGT7Q9UJ14 662 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 PTGESO14684 152 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 METTL18O95568 372 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 NPR3P17342 541 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 PTPN1P18031 435 aaKnown RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 ADRA1DP25100 572 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 NOS2P35228 1153 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 ETV4P43268 484 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 NEK3P51956 506 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 SWT1Q5T5J6 900 aaKnown RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 ICE2Q659A1 982 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 PAQR9Q6ZVX9 377 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 PRPF39Q86UA1 669 aaKnown RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 CHSY1Q86X52 802 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 DEFB106AQ8N104 65 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 SIGLEC10Q96LC7 697 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 ARHGEF3Q9NR81 526 aa16.75■□□□□ 0.27
UBE3D-201ENST00000237186 ZC3H7BQ9UGR2 993 aaKnown RBP16.75■□□□□ 0.27
UBE3D-201ENST00000237186 CHUKO15111 745 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 APOEP02649 317 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 ALDH3A1P30838 453 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 ARL4AP40617 200 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 CDK16Q00536 496 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 SEPT7Q16181 437 aaKnown RBP16.74■□□□□ 0.27
UBE3D-201ENST00000237186 ZNF534Q76KX8 674 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 ASRGL1Q7L266 308 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 OTOAQ7RTW8 1153 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 FAM228AQ86W67 206 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 HACE1Q8IYU2 909 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 APOPT1Q96IL0 206 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 NPY6RQ99463 290 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 MAGEB5Q9BZ81 275 aa16.74■□□□□ 0.27
UBE3D-201ENST00000237186 XAB2Q9HCS7 855 aaKnown RBP16.74■□□□□ 0.27
UBE3D-201ENST00000237186 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■■■■ 124.8
UBE3D-201ENST00000237186 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 CYB561D2O14569 222 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 LPXNO60711 386 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 MAP3K6O95382 1288 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 MLNP12872 115 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 NQO1P15559 274 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 AMPD1P23109 780 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 PURAQ00577 322 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SNCBQ16143 134 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 CCL14Q16627 93 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 LGSNQ5TDP6 509 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 FAXCQ5TGI0 409 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 OTUD1Q5VV17 481 aaPredicted RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 HEATR6Q6AI08 1181 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 C10orf82Q8WW14 230 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 HTR3CQ8WXA8 447 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SLC2A13Q96QE2 648 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 EBNA1BP2Q99848 306 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 MANSC4A6NHS7 340 aaPredicted RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 DCTN3O75935 186 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 ATP5HO75947 161 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 KRT37O76014 449 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 IL1BP01584 269 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SNRPAP09012 282 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 GOT1P17174 413 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 FDFT1P37268 417 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SULT1E1P49888 294 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 BEX3Q00994 111 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms