RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 M0QZ92 97 aa21.32■■□□□ 1
SNX3-201ENST00000230085 CAPN9O14815 690 aa21.32■■□□□ 1
SNX3-201ENST00000230085 PIM1P11309 404 aaPredicted RBP21.32■■□□□ 1
SNX3-201ENST00000230085 AP3M2P53677 418 aa21.32■■□□□ 1
SNX3-201ENST00000230085 MXD4Q14582 209 aaPredicted RBP21.32■■□□□ 1
SNX3-201ENST00000230085 MBTPS1Q14703 1052 aa21.32■■□□□ 1
SNX3-201ENST00000230085 DBN1Q16643 649 aa21.32■■□□□ 1
SNX3-201ENST00000230085 TRMT5Q32P41 509 aaKnown RBP21.32■■□□□ 1
SNX3-201ENST00000230085 FAM26DQ5JW98 314 aa21.32■■□□□ 1
SNX3-201ENST00000230085 THEMIS2Q5TEJ8 643 aa21.32■■□□□ 1
SNX3-201ENST00000230085 NLRP7Q8WX94 980 aa21.32■■□□□ 1
SNX3-201ENST00000230085 MCUR1Q96AQ8 359 aa21.32■■□□□ 1
SNX3-201ENST00000230085 FNBP1Q96RU3 617 aa21.32■■□□□ 1
SNX3-201ENST00000230085 OSMRQ99650 979 aa21.32■■□□□ 1
SNX3-201ENST00000230085 FAM213AQ9BRX8 229 aa21.32■■□□□ 1
SNX3-201ENST00000230085 TMEM120AQ9BXJ8 343 aa21.32■■□□□ 1
SNX3-201ENST00000230085 APOBEC3GQ9HC16 384 aaKnown RBP21.32■■□□□ 1
SNX3-201ENST00000230085 ETAA1Q9NY74 926 aa21.32■■□□□ 1
SNX3-201ENST00000230085 PCDHB4Q9Y5E5 795 aa21.32■■□□□ 1
SNX3-201ENST00000230085 SCN5AQ14524 2016 aa21.32■■□□□ 1
SNX3-201ENST00000230085 A0A087WZ62 844 aa21.31■■□□□ 1
SNX3-201ENST00000230085 LDHAP00338 332 aaKnown RBP21.31■■□□□ 1
SNX3-201ENST00000230085 CALCAP01258 141 aa21.31■■□□□ 1
SNX3-201ENST00000230085 PDHA1P08559 390 aa21.31■■□□□ 1
SNX3-201ENST00000230085 ETS1P14921 441 aa21.31■■□□□ 1
SNX3-201ENST00000230085 ATF7P17544 494 aaPredicted RBP21.31■■□□□ 1
SNX3-201ENST00000230085 GPNMBQ14956 572 aa21.31■■□□□ 1
SNX3-201ENST00000230085 SLFN12LQ6IEE8 588 aa21.31■■□□□ 1
SNX3-201ENST00000230085 C3orf62Q6ZUJ4 267 aa21.31■■□□□ 1
SNX3-201ENST00000230085 THNSL1Q8IYQ7 743 aa21.31■■□□□ 1
SNX3-201ENST00000230085 VPS52Q8N1B4 723 aa21.31■■□□□ 1
SNX3-201ENST00000230085 RNF149Q8NC42 400 aa21.31■■□□□ 1
SNX3-201ENST00000230085 TMEM40Q8WWA1 233 aa21.31■■□□□ 1
SNX3-201ENST00000230085 NCSTNQ92542 709 aa21.31■■□□□ 1
SNX3-201ENST00000230085 PTPRN2Q92932 1015 aa21.31■■□□□ 1
SNX3-201ENST00000230085 STMN2Q93045 179 aa21.31■■□□□ 1
SNX3-201ENST00000230085 AZIN2Q96A70 460 aa21.31■■□□□ 1
SNX3-201ENST00000230085 OXNAD1Q96HP4 312 aaPredicted RBP21.31■■□□□ 1
SNX3-201ENST00000230085 CGRRF1Q99675 332 aa21.31■■□□□ 1
SNX3-201ENST00000230085 FDXACB1Q9BRP7 624 aaPredicted RBP21.31■■□□□ 1
SNX3-201ENST00000230085 C1orf21Q9H246 121 aa21.31■■□□□ 1
SNX3-201ENST00000230085 ARHGEF4Q9NR80 690 aa21.31■■□□□ 1
SNX3-201ENST00000230085 DLGAP2Q9P1A6 1054 aa21.31■■□□□ 1
SNX3-201ENST00000230085 CPSF2Q9P2I0 782 aaKnown RBP21.31■■□□□ 1
SNX3-201ENST00000230085 ZNF180Q9UJW8 692 aa21.31■■□□□ 1
SNX3-201ENST00000230085 PCDHGC3Q9UN70 934 aa21.31■■□□□ 1
SNX3-201ENST00000230085 USTQ9Y2C2 406 aa21.31■■□□□ 1
SNX3-201ENST00000230085 C2CD2Q9Y426 696 aa21.31■■□□□ 1
SNX3-201ENST00000230085 TRPV2Q9Y5S1 764 aa21.31■■□□□ 1
SNX3-201ENST00000230085 NR2E3Q9Y5X4 410 aa21.31■■□□□ 1
SNX3-201ENST00000230085 MAP3K7O43318 606 aa21.31■■□□□ 1
SNX3-201ENST00000230085 KRT36O76013 467 aa21.31■■□□□ 1
SNX3-201ENST00000230085 RTN3O95197 1032 aaPredicted RBP21.31■■□□□ 1
SNX3-201ENST00000230085 CFHP08603 1231 aa21.31■■□□□ 1
SNX3-201ENST00000230085 ESRRAP11474 423 aaPredicted RBP21.31■■□□□ 1
SNX3-201ENST00000230085 SERPINB3P29508 390 aa21.31■■□□□ 1
SNX3-201ENST00000230085 RPL7AP62424 266 aaKnown RBP21.31■■□□□ 1
SNX3-201ENST00000230085 CAPSQ13938 189 aa21.31■■□□□ 1
SNX3-201ENST00000230085 PDIK1LQ8N165 341 aa21.31■■□□□ 1
SNX3-201ENST00000230085 ZNF606Q8WXB4 792 aa21.31■■□□□ 1
SNX3-201ENST00000230085 BADQ92934 168 aa21.31■■□□□ 1
SNX3-201ENST00000230085 KIFC3Q9BVG8 833 aa21.31■■□□□ 1
SNX3-201ENST00000230085 IFT122Q9HBG6 1241 aa21.31■■□□□ 1
SNX3-201ENST00000230085 SLC17A7Q9P2U7 560 aa21.31■■□□□ 1
SNX3-201ENST00000230085 SORCS3Q9UPU3 1222 aa21.31■■□□□ 1
SNX3-201ENST00000230085 CFAP69A5D8W1 941 aa21.3■■□□□ 1
SNX3-201ENST00000230085 PI4K2BG5E9Z4 385 aa21.3■■□□□ 1
SNX3-201ENST00000230085 SGK1O00141 431 aa21.3■■□□□ 1
SNX3-201ENST00000230085 LPXNO60711 386 aa21.3■■□□□ 1
SNX3-201ENST00000230085 MT-ND3P03897 115 aa21.3■■□□□ 1
SNX3-201ENST00000230085 KRT7P08729 469 aa21.3■■□□□ 1
SNX3-201ENST00000230085 WEE2P0C1S8 567 aa21.3■■□□□ 1
SNX3-201ENST00000230085 EIF4BP23588 611 aaKnown RBP21.3■■□□□ 1
SNX3-201ENST00000230085 NOP14P78316 857 aaKnown RBP21.3■■□□□ 1
SNX3-201ENST00000230085 RCN2Q14257 317 aa21.3■■□□□ 1
SNX3-201ENST00000230085 ATP13A4Q4VNC1 1196 aa21.3■■□□□ 1
SNX3-201ENST00000230085 FNBP1LQ5T0N5 605 aa21.3■■□□□ 1
SNX3-201ENST00000230085 TMEM270Q6UE05 265 aa21.3■■□□□ 1
SNX3-201ENST00000230085 KYAT3Q6YP21 454 aaKnown RBP21.3■■□□□ 1
SNX3-201ENST00000230085 TMEM121Q9BTD3 319 aa21.3■■□□□ 1
SNX3-201ENST00000230085 KRT82Q9NSB4 513 aa21.3■■□□□ 1
SNX3-201ENST00000230085 IL1RAPL1Q9NZN1 696 aa21.3■■□□□ 1
SNX3-201ENST00000230085 DCTN4Q9UJW0 460 aa21.3■■□□□ 1
SNX3-201ENST00000230085 TET1Q8NFU7 2136 aa21.3■■□□□ 1
SNX3-201ENST00000230085 CEP290O15078 2479 aa21.29■■□□□ 1
SNX3-201ENST00000230085 NBNO60934 754 aa21.29■■□□□ 1
SNX3-201ENST00000230085 CSF2RAP15509 400 aa21.29■■□□□ 1
SNX3-201ENST00000230085 SSTR1P30872 391 aa21.29■■□□□ 1
SNX3-201ENST00000230085 CRYBB1P53674 252 aaPredicted RBP21.29■■□□□ 1
SNX3-201ENST00000230085 RPL26P61254 145 aaKnown RBP21.29■■□□□ 1
SNX3-201ENST00000230085 CDC42EP1Q00587 391 aa21.29■■□□□ 1
SNX3-201ENST00000230085 DNAL1Q4LDG9 190 aa21.29■■□□□ 1
SNX3-201ENST00000230085 MSS51Q4VC12 460 aa21.29■■□□□ 1
SNX3-201ENST00000230085 C2CD6Q53TS8 623 aa21.29■■□□□ 1
SNX3-201ENST00000230085 DNAJC24Q6P3W2 148 aa21.29■■□□□ 1
SNX3-201ENST00000230085 RINLQ6ZS11 566 aa21.29■■□□□ 1
SNX3-201ENST00000230085 TMEM35BQ8NCS4 154 aa21.29■■□□□ 1
SNX3-201ENST00000230085 FBXO36Q8NEA4 188 aa21.29■■□□□ 1
SNX3-201ENST00000230085 CCDC110Q8TBZ0 833 aa21.29■■□□□ 1
SNX3-201ENST00000230085 SIKE1Q9BRV8 207 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms