RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CREB3O43889 395 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 KRT38O76015 456 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 ASS1P00966 412 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 C1QAP02745 245 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 OATP04181 439 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 STAT5BP51692 787 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 EIF3EP60228 445 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 YWHAEP62258 255 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 GAD2Q05329 585 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 NCOA4Q13772 614 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 EFHC1Q5JVL4 640 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 TXNRD3NBQ6F5E7 133 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 PRPF39Q86UA1 669 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 B4GALNT2Q8NHY0 566 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 LZICQ8WZA0 190 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 CCDC97Q96F63 343 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 TUBGCP5Q96RT8 1024 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 LHX5Q9H2C1 402 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 ARMCX1Q9P291 453 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 ATXN10Q9UBB4 475 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 UQCRBP14927 111 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 PSMA2P25787 234 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 CRHR1P34998 444 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 BTKQ06187 659 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 MED21Q13503 144 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 MORN1Q5T089 497 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 TIFABQ6ZNK6 161 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 NPLOC4Q8TAT6 608 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 RTP4Q96DX8 246 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 SPATA33Q96N06 139 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 THTPAQ9BU02 230 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 SUDS3Q9H7L9 328 aaPredicted RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 ALG13Q9NP73 1137 aaKnown RBP16.49■□□□□ 0.23
SF3A2-201ENST00000221494 XPNPEP1Q9NQW7 623 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 THAP1Q9NVV9 213 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 PAK5Q9P286 719 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
SF3A2-201ENST00000221494 SDR42E2A6NKP2 422 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 CASQ2O14958 399 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-201ENST00000221494 LGR5O75473 907 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 CPOXP36551 454 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 TM4SF4P48230 202 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
SF3A2-201ENST00000221494 BASP1P80723 227 aaKnown RBP16.48■□□□□ 0.23
SF3A2-201ENST00000221494 ROR1Q01973 937 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 TFDP2Q14188 446 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 MAP7Q14244 749 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 FAM47CQ5HY64 1035 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 SH2D4BQ5SQS7 431 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 NUDCD3Q8IVD9 361 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 ARID3BQ8IVW6 561 aaPredicted RBP16.48■□□□□ 0.23
SF3A2-201ENST00000221494 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 NDNQ99608 321 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 C12orf65Q9H3J6 166 aaKnown RBP16.48■□□□□ 0.23
SF3A2-201ENST00000221494 PTPRJQ12913 1337 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
SF3A2-201ENST00000221494 TCRBV7S3A2A0A539 114 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 E5RJQ4 531 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 FAM189A1O60320 539 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 LRCH4O75427 683 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 BPGMP07738 259 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 NAMPTP43490 491 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 SOX10P56693 466 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 SREBF2Q12772 1141 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 NOMO1Q15155 1222 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 SURF1Q15526 300 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 MTERF2Q49AM1 385 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 HSF5Q4G112 596 aaPredicted RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 FAM160B1Q5W0V3 765 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 CYS1Q717R9 158 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 WDR49Q8IV35 697 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 WDR75Q8IWA0 830 aaKnown RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 UNC45BQ8IWX7 931 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 TINF2Q9BSI4 451 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 KLHL4Q9C0H6 718 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 NIF3L1Q9GZT8 377 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 POLR3FQ9H1D9 316 aaPredicted RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 A0A088AWK7 358 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 A0A0B4J269 797 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 RBP3P10745 1247 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 PRDX6P30041 224 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 TARBP2Q15633 366 aaKnown RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 PABPC1LQ4VXU2 614 aaKnown RBP16.47■□□□□ 0.23
SF3A2-201ENST00000221494 LCA5Q86VQ0 697 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 RASSF3Q86WH2 238 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 TMEM126BQ8IUX1 230 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 MCUQ8NE86 351 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 ACMSDQ8TDX5 336 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 ADAM33Q9BZ11 813 aa16.47■□□□□ 0.23
SF3A2-201ENST00000221494 TMEM134Q9H6X4 195 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms