RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ASMTLO95671 621 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 OAS1P00973 400 aaKnown RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GSTA1P08263 222 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CYBAP13498 195 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 KRT4P19013 534 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TPSB2P20231 275 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 PCSK1P29120 753 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 RAB27AP51159 221 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 MAP3K7CLP57077 242 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 SARNPP82979 210 aaKnown RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 SF3A3Q12874 501 aaKnown RBP eCLIP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TPSAB1Q15661 275 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 LACTB2Q53H82 288 aaPredicted RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 NCBP2-AS2Q69YL0 99 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CLEC20AQ6ZU45 233 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CCDC110Q8TBZ0 833 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TFB1MQ8WVM0 346 aaKnown RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CCT6BQ92526 530 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 LRRC39Q96DD0 335 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 DHRS4Q9BTZ2 278 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 KIF9Q9HAQ2 790 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 POPDC2Q9HBU9 364 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 COX16Q9P0S2 106 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 FZD10Q9ULW2 581 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 ARL2BPQ9Y2Y0 163 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TEX264Q9Y6I9 313 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TCRBV9S1A1TA0A576 114 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 M0QYT0 321 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TM9SF1O15321 606 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GCATO75600 419 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 AP1G2O75843 785 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 PGK1P00558 417 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 IGHA2P01877 340 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 GOT1P17174 413 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 MAGEA6P43360 314 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 SCTRP47872 440 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TKTL1P51854 596 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 AIF1P55008 147 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 DEUP1Q05D60 604 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 PTK7Q13308 1070 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 MTFR1Q15390 333 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 KCNT2Q6UVM3 1135 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 FAM35AQ86V20 835 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 MCUQ8NE86 351 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 TRPV1Q8NER1 839 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 RNF139Q8WU17 664 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 PITPNM3Q9BZ71 974 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 XAB2Q9HCS7 855 aaKnown RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 DTLQ9NZJ0 730 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 KLHL14Q9P2G3 628 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
VAMP3-201ENST00000054666 CDH9Q9ULB4 789 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 PTCH2Q9Y6C5 1203 aa8.56□□□□□ -1.04
VAMP3-201ENST00000054666 SF3B1O75533 1304 aaKnown RBP eCLIP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 ARL5CA6NH57 179 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 PPP1R12AO14974 1030 aaPredicted RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SEPT4O43236 478 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 MT-ND3P03897 115 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 GSTA2P09210 222 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 ODC1P11926 461 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 TAC1P20366 129 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 AMPD1P23109 780 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 RPA3P35244 121 aaPredicted RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 FDFT1P37268 417 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SCNN1GP51170 649 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 CLCNKBP51801 687 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 WDR4P57081 412 aaKnown RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 NME3Q13232 169 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 PDK4Q16654 411 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 FAM47EQ6ZV65 393 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SERINC5Q86VE9 423 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 METTL23Q86XA0 190 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 CTAGE3PQ8IX95 158 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 DCAKDQ8WVC6 231 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SLC44A1Q8WWI5 657 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 HTR3CQ8WXA8 447 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 LPPQ93052 612 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 WNT8BQ93098 351 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SMARCD1Q96GM5 515 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 SLC2A13Q96QE2 648 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 NPY6RQ99463 290 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 ULBP1Q9BZM6 244 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 IQCGQ9H095 443 aaKnown RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
VAMP3-201ENST00000054666 CNGB3Q9NQW8 809 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
VAMP3-201ENST00000054666 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
VAMP3-201ENST00000054666 A0A1W2PPM1 405 aa8.54□□□□□ -1.04
VAMP3-201ENST00000054666 CASTOR2A6NHX0 329 aa8.54□□□□□ -1.04
VAMP3-201ENST00000054666 MEIS3P2A8K0S8 358 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms