RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 EnahQ03173 802 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 DselQ0VBN2 1207 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 SnrpaQ62189 287 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 SrlQ7TQ48 910 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Tmem260Q8BMD6 703 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Dcun1d2Q8BZJ7 259 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Unc45bQ8CGY6 931 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Rftn2Q8CHX7 500 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Colgalt1Q8K297 617 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Fam114a2Q8VE88 497 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 GneQ91WG8 722 aaKnown RBP13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Zfp64Q99KE8 643 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Katnbl1Q9CWJ3 299 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Pold3Q9EQ28 462 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ccdc86Q9JJ89 426 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Ripk3Q9QZL0 486 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Slc23a1Q9Z2J0 605 aa13.15□□□□□ -0.3
Rnf4-201ENSMUST00000030992 Lrriq4A6H6A4 596 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Atf6F6VAN0 656 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mup13L7N222 235 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Cyp27b1O35084 507 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Dmp1O55188 503 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Pdcd1Q02242 288 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PostnQ62009 838 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Cyp3a13Q64464 503 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Sp140Q6NSQ5 534 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rilpl2Q99LE1 197 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mrps17Q9CQE3 120 aaKnown RBP13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rsrc1Q9DBU6 334 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Acot1O55137 419 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 HpdP49429 393 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tbc1d10aP58802 500 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Serpina6Q06770 397 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 AcdQ5EE38 416 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Zfp759Q7M6X3 721 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Znf365Q8BG89 408 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rem2Q8VEL9 341 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Atad3Q925I1 591 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Grk2Q99MK8 689 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Taf7lQ9D3R9 471 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tlr9Q9EQU3 1032 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Msgn1Q9JK54 188 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Stap1Q9JM90 297 aaKnown RBP13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ror1Q9Z139 937 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Iqcj-Schip1A0A088MLT8 559 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Fam81bA0A140LI28 432 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gm4756A0A140LIS8 335 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 ZxdbA2CE44 873 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rtn2O70622 471 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Schip1P0DPB4 484 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 FerP70451 823 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mcm9Q2KHI9 1134 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ndst1Q3UHN9 882 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Zbtb8osQ505B7 168 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Grm6Q5NCH9 871 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gba2Q69ZF3 918 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Prr18Q6PAN7 307 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mrgprb8Q7TN51 330 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Reps2Q80XA6 521 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Usp6nlQ80XC3 819 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tmco6Q8BQX5 494 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Snx17Q8BVL3 470 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 VcpkmtQ8C436 228 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mbtps2Q8CHX6 515 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Nt5c1bQ91YE9 573 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Lpin1Q91ZP3 924 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Ddx21Q9JIK5 851 aaKnown RBP13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Nme7Q9QXL8 395 aa13.14□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Tex13c2A0A0G2JGA3 530 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Gm281D3Z1Y0 860 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfm1O88998 485 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rbm20Q3UQS8 1199 aaKnown RBP13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 ScapQ6GQT6 1276 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Xpo1Q6P5F9 1071 aaKnown RBP13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Rxfp1Q6R6I7 758 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Stk40Q7TNL3 435 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Olfr1105Q7TR58 312 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Dnajc16Q80TN4 772 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mis18bp1Q80WQ8 998 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Zfp454Q80Y34 536 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 NaprtQ8CC86 538 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Timd2Q8R183 305 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Lrp8Q924X6 996 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 HgsQ99LI8 775 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Commd8Q9CZG3 183 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Oma1Q9D8H7 521 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mbtps1Q9WTZ2 1052 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Serpina3iD3Z450 408 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 NfkbieO54910 364 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Emilin3P59900 758 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Kcnc2Q14B80 642 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Sult1d1Q3UZZ6 295 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Grid2Q61625 1007 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 GnsQ8BFR4 544 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 PimregQ8BFY7 231 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Slc35f5Q8R314 524 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Mgat5Q8R4G6 740 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Stx18Q8VDS8 334 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Akr1c14Q91WT7 323 aa13.13□□□□□ -0.31
Rnf4-201ENSMUST00000030992 Bag2Q91YN9 210 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms