RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PEBP4Q96S96 227 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 PNKPQ96T60 521 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-221ENST00000641573 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 CHST7Q9NS84 486 aa13.68□□□□□ -0.22
PHGDH-221ENST00000641573 VWA8A3KMH1 1905 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 TARSL2A2RTX5 802 aaKnown RBP13.67□□□□□ -0.22
PHGDH-221ENST00000641573 LRRD1A4D1F6 860 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 CARNS1A5YM72 827 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 TMEM221A6NGB7 291 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 E7ENQ6 273 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 M0R296 226 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PRPSAP2O60256 369 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SOD2P04179 222 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 RARAP10276 462 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 RALAP11233 206 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-221ENST00000641573 NOS2P35228 1153 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 MAGEA11P43364 429 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SULT1E1P49888 294 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 COPS2P61201 443 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 GPR17Q13304 367 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 COL19A1Q14993 1142 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SIX1Q15475 284 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PSMD5Q16401 504 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 KCNT1Q5JUK3 1230 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 IER5LQ5T953 404 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PM20D1Q6GTS8 502 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SCYL2Q6P3W7 929 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SPOCD1Q6ZMY3 1216 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 ZDHHC14Q8IZN3 488 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SCML4Q8N228 414 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 MAIP1Q8WWC4 291 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 HSPH1Q92598 858 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 TBCBQ99426 244 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 HERPUD2Q9BSE4 406 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 DDX47Q9H0S4 455 aaKnown RBP13.67□□□□□ -0.22
PHGDH-221ENST00000641573 IRF2BPLQ9H1B7 796 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 POPDC2Q9HBU9 364 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 MTRRQ9UBK8 725 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 BACE2Q9Y5Z0 518 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 USP3Q9Y6I4 520 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 NLRC5Q86WI3 1866 aa13.67□□□□□ -0.22
PHGDH-221ENST00000641573 MTMR11A4FU01 709 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 TRIM66O15016 1216 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 PHF2O75151 1096 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 LTFP02788 710 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 KDELR1P24390 212 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 PTPN7P35236 360 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 SLC5A3P53794 718 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 HDAC4P56524 1084 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 SMARCB1Q12824 385 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 BOLA3Q53S33 107 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 DCAF6Q58WW2 860 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 KIAA1841Q6NSI8 718 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 RNF19BQ6ZMZ0 732 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 TRIM67Q6ZTA4 783 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 CYP4V2Q6ZWL3 525 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-221ENST00000641573 STRADAQ7RTN6 431 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 BHLHA9Q7RTU4 235 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 ATAD1Q8NBU5 361 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 KCTD6Q8NC69 237 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-221ENST00000641573 SCAMP5Q8TAC9 235 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 HDAC7Q8WUI4 952 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 NPY6RQ99463 290 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 STAP1Q9ULZ2 295 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 NAALADL1Q9UQQ1 740 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
PHGDH-221ENST00000641573 hCG_1818297A0A087WSY0 165 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 C3orf70A6NLC5 250 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 CAPN9O14815 690 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 ADAM12O43184 909 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 MBTPS2O43462 519 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 RAD51CO43502 376 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 VNN2O95498 520 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 FYNP06241 537 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 TUBBP07437 444 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 KRT10P13645 584 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 H2AFXP16104 143 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-221ENST00000641573 CHRNA3P32297 505 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 CDKN2BP42772 138 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 GLUD2P49448 558 aa13.65□□□□□ -0.22
PHGDH-221ENST00000641573 GPR15P49685 360 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms