RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 NME3Q13232 169 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 PIGHQ14442 188 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 MESDQ14696 234 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 CDO1Q16878 200 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 DAAM2Q86T65 1068 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 MIB1Q86YT6 1006 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 DEFB106AQ8N104 65 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 RXFP2Q8WXD0 754 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 ACSF2Q96CM8 615 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 DDIT4Q9NX09 232 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 DNMT3BQ9UBC3 853 aaKnown RBP13.53□□□□□ -0.24
PHGDH-218ENST00000641491 COG5Q9UP83 839 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
PHGDH-218ENST00000641491 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.24
PHGDH-218ENST00000641491 FAM92AA1XBS5 289 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF840PA6NDX5 716 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 M0QYT0 321 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF263O14978 683 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 GLP2RO95838 553 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 HDCP19113 662 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ATP11AP98196 1134 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 MTA1Q13330 715 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 TEAD2Q15562 447 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 BEND5Q7L4P6 421 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ARCQ7LC44 396 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 EMC1Q8N766 993 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 MAB21L3Q8N8X9 362 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ARHGEF26Q96DR7 871 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 CNPY3Q9BT09 278 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 TASP1Q9H6P5 420 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 IL37Q9NZH6 218 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 NENFQ9UMX5 172 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
PHGDH-218ENST00000641491 SH3BP1Q9Y3L3 701 aa13.52□□□□□ -0.25
PHGDH-218ENST00000641491 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 SLC12A8A0AV02 714 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 PJA2O43164 708 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 PRPSAP2O60256 369 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 TBX10O75333 385 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 SLC1A1P43005 524 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 HARS2P49590 506 aaKnown RBP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 COG7P83436 770 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 ACAP1Q15027 740 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 TMC8Q8IU68 726 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 TRIM58Q8NG06 486 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 CFAP57Q96MR6 1250 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 SLC2A13Q96QE2 648 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 WDR6Q9NNW5 1121 aaKnown RBP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHGDH-218ENST00000641491 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 NAALADL1Q9UQQ1 740 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 NR2E1Q9Y466 385 aa13.51□□□□□ -0.25
PHGDH-218ENST00000641491 CHD7Q9P2D1 2997 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TMEM191CA6NGB0 347 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 C2CD4BA6NLJ0 364 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 MOCS3O95396 460 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 GJB6O95452 261 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TRUB2O95900 331 aaKnown RBP13.5□□□□□ -0.25
PHGDH-218ENST00000641491 F11P03951 625 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 HMBSP08397 361 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 IRF1P10914 325 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TNNT1P13805 278 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 CCR1P32246 355 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 RFC1P35251 1148 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-218ENST00000641491 GJC1P36383 396 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 FLT3P36888 993 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 CETN2P41208 172 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 PTPN9P43378 593 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 EPHA5P54756 1037 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TBX4P57082 545 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 NTHL1P78549 312 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 SMAD4Q13485 552 aaKnown RBP13.5□□□□□ -0.25
PHGDH-218ENST00000641491 KCNC3Q14003 757 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 TAF5Q15542 800 aa13.5□□□□□ -0.25
PHGDH-218ENST00000641491 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms