RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CHRM3P20309 590 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 MGAT1P26572 445 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SERPINB3P29508 390 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 HMOX2P30519 316 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 RPL22P35268 128 aaKnown RBP14.87□□□□□ -0.03
SCARB2-216ENST00000639300 LINC00523Q86TU6 105 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 CCNJLQ8IV13 435 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 HTR3CQ8WXA8 447 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 NRBF2Q96F24 287 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 BATF3Q9NR55 127 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 WDR27A2RRH5 827 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SPATA31C2B4DYI2 1134 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 LIASO43766 372 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 MLH1P40692 756 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 MGAT5Q09328 741 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 FUKQ8N0W3 1084 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 GANCQ8TET4 914 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 PRKAG2Q9UGJ0 569 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 NUDT5Q9UKK9 219 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 R3HDM2Q9Y2K5 976 aaKnown RBP14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SUPT3HB4E1H0 165 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 TM9SF1O15321 606 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SUPT3HO75486 399 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 ENDOD1O94919 500 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 MMP14P50281 582 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 CRADDP78560 199 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SLC6A3Q01959 620 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 HSDL1Q3SXM5 330 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SPDYAQ5MJ70 313 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 N4BP2L1Q5TBK1 243 aaPredicted RBP14.87□□□□□ -0.03
SCARB2-216ENST00000639300 NEUROG2Q9H2A3 272 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 SLCO1B3Q9NPD5 702 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 ARHGAP26Q9UNA1 814 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 ADGRA2Q96PE1 1338 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 NNMTP40261 264 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 VHLP40337 213 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 RAD51Q06609 339 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 POU5F2Q8N7G0 328 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 C12orf29Q8N999 325 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 RBM22Q9NW64 420 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCARB2-216ENST00000639300 NSMCE4AQ9NXX6 385 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 V9GYQ6 96 aa14.87□□□□□ -0.03
SCARB2-216ENST00000639300 RNF103O00237 685 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 FCHO1O14526 889 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 TIMM44O43615 452 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 LCA5LO95447 670 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 C16orf46Q6P387 395 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 RIOX2Q8IUF8 465 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 USP6NLQ92738 828 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 CASZ1Q86V15 1759 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 M0R2N6 131 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 LYPLA2O95372 231 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 CSE1LP55060 971 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 EFEMP1Q12805 493 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 FLOT2Q14254 428 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 MAPRE1Q15691 268 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 SGO1Q5FBB7 561 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 CELF3Q5SZQ8 465 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 NETO2Q8NC67 525 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 MFSD14AQ96MC6 490 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ACO2Q99798 780 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 TRIM54Q9BYV2 358 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 GBA2Q9HCG7 927 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 VANGL2Q9ULK5 521 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ACOT9Q9Y305 439 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 AFDNP55196 1824 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 PRRG1O14668 218 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ATP6V1G2O95670 118 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ASS1P00966 412 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 PTPN4P29074 926 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 EEF1DP29692 281 aaKnown RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 PLIN5Q00G26 463 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 RNF217Q8TC41 542 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 TRPM4Q8TD43 1214 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
SCARB2-216ENST00000639300 MED1Q15648 1581 aaPredicted RBP14.86□□□□□ -0.03
SCARB2-216ENST00000639300 ZNF862O60290 1169 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 MAFO75444 373 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 CST3P01034 146 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 ZRANB3Q5FWF4 1079 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 SCUBE1Q8IWY4 988 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 LRRC57Q8N9N7 239 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 CKAP2Q8WWK9 683 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 ART4Q93070 314 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 WNK4Q96J92 1243 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 CASS4Q9NQ75 786 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 RHOBTB1O94844 696 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 ZCCHC18P0CG32 403 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 STMN1P16949 149 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 FICDQ9BVA6 458 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 DCLRE1BQ9H816 532 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 CD274Q9NZQ7 290 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 DCDC2CA8MYV0 355 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 NUDT17P0C025 328 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 CALB2P22676 271 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GEMP55040 296 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms