RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 PDGFRAP16234 1089 aa15.08■□□□□ 0
CLN6-215ENST00000636674 SP100P23497 879 aaPredicted RBP15.08■□□□□ 0
CLN6-215ENST00000636674 MBTD1Q05BQ5 628 aa15.08■□□□□ 0
CLN6-215ENST00000636674 KRT81Q14533 505 aa15.08■□□□□ 0
CLN6-215ENST00000636674 STXBP5Q5T5C0 1151 aa15.08■□□□□ 0
CLN6-215ENST00000636674 SH3PXD2AQ5TCZ1 1133 aa15.08■□□□□ 0
CLN6-215ENST00000636674 LBX2Q6XYB7 198 aa15.08■□□□□ 0
CLN6-215ENST00000636674 PAXIP1Q6ZW49 1069 aaPredicted RBP15.08■□□□□ 0
CLN6-215ENST00000636674 CYS1Q717R9 158 aa15.08■□□□□ 0
CLN6-215ENST00000636674 RIOX2Q8IUF8 465 aa15.08■□□□□ 0
CLN6-215ENST00000636674 MICALL2Q8IY33 904 aa15.08■□□□□ 0
CLN6-215ENST00000636674 TTC39CQ8N584 583 aa15.08■□□□□ 0
CLN6-215ENST00000636674 GSDMBQ8TAX9 411 aa15.08■□□□□ 0
CLN6-215ENST00000636674 AFG1LQ8WV93 481 aa15.08■□□□□ 0
CLN6-215ENST00000636674 IFT43Q96FT9 208 aa15.08■□□□□ 0
CLN6-215ENST00000636674 ZNF670Q9BS34 389 aa15.08■□□□□ 0
CLN6-215ENST00000636674 C1orf21Q9H246 121 aa15.08■□□□□ 0
CLN6-215ENST00000636674 GBA2Q9HCG7 927 aaPredicted RBP15.08■□□□□ 0
CLN6-215ENST00000636674 PCDH18Q9HCL0 1135 aa15.08■□□□□ 0
CLN6-215ENST00000636674 ARMCX1Q9P291 453 aa15.08■□□□□ 0
CLN6-215ENST00000636674 TAGLN3Q9UI15 199 aa15.08■□□□□ 0
CLN6-215ENST00000636674 ANGPTL2Q9UKU9 493 aa15.08■□□□□ 0
CLN6-215ENST00000636674 KIAA1257Q9ULG3 409 aa15.08■□□□□ 0
CLN6-215ENST00000636674 HBS1LQ9Y450 684 aaKnown RBP15.08■□□□□ 0
CLN6-215ENST00000636674 SOWAHBA6NEL2 793 aa15.07■□□□□ 0
CLN6-215ENST00000636674 MDM4O15151 490 aa15.07■□□□□ 0
CLN6-215ENST00000636674 B4GALT5O43286 388 aa15.07■□□□□ 0
CLN6-215ENST00000636674 AHCYL1O43865 530 aa15.07■□□□□ 0
CLN6-215ENST00000636674 TM7SF2O76062 418 aa15.07■□□□□ 0
CLN6-215ENST00000636674 STAU1O95793 577 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 ITGB3P05106 788 aa15.07■□□□□ 0
CLN6-215ENST00000636674 BPGMP07738 259 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CSH1P0DML2 217 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CSH2P0DML3 217 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CNTFP26441 200 aa15.07■□□□□ 0
CLN6-215ENST00000636674 RBL1P28749 1068 aa15.07■□□□□ 0
CLN6-215ENST00000636674 TUBP50607 506 aa15.07■□□□□ 0
CLN6-215ENST00000636674 BCAR1P56945 870 aa15.07■□□□□ 0
CLN6-215ENST00000636674 WASHC5Q12768 1159 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ORC1Q13415 861 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CHI3L2Q15782 390 aa15.07■□□□□ 0
CLN6-215ENST00000636674 GSTA3Q16772 222 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CES4AQ5XG92 561 aa15.07■□□□□ 0
CLN6-215ENST00000636674 NAIF1Q69YI7 327 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 TMEM154Q6P9G4 183 aa15.07■□□□□ 0
CLN6-215ENST00000636674 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
CLN6-215ENST00000636674 LCLAT1Q6UWP7 414 aa15.07■□□□□ 0
CLN6-215ENST00000636674 UNC5AQ6ZN44 842 aa15.07■□□□□ 0
CLN6-215ENST00000636674 FAM183BPQ6ZVS7 135 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ZNF534Q76KX8 674 aa15.07■□□□□ 0
CLN6-215ENST00000636674 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CRLF3Q8IUI8 442 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ARID3BQ8IVW6 561 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 GPR20Q99678 358 aa15.07■□□□□ 0
CLN6-215ENST00000636674 MECRQ9BV79 373 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CCDC106Q9BWC9 280 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ASB7Q9H672 318 aa15.07■□□□□ 0
CLN6-215ENST00000636674 IQCA1LA6NCM1 817 aa15.07■□□□□ 0
CLN6-215ENST00000636674 B2RBV5 119 aa15.07■□□□□ 0
CLN6-215ENST00000636674 H3BRJ5 948 aa15.07■□□□□ 0
CLN6-215ENST00000636674 SERPINA6P08185 405 aa15.07■□□□□ 0
CLN6-215ENST00000636674 OSTNP61366 133 aa15.07■□□□□ 0
CLN6-215ENST00000636674 THOC5Q13769 683 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 RCN2Q14257 317 aa15.07■□□□□ 0
CLN6-215ENST00000636674 STILQ15468 1287 aa15.07■□□□□ 0
CLN6-215ENST00000636674 C15orf59Q2T9L4 293 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 NBPF20Q3BBV1 942 aa15.07■□□□□ 0
CLN6-215ENST00000636674 KYAT3Q6YP21 454 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 NUDCD3Q8IVD9 361 aa15.07■□□□□ 0
CLN6-215ENST00000636674 CDKL3Q8IVW4 592 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 TMEM192Q8IY95 271 aa15.07■□□□□ 0
CLN6-215ENST00000636674 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 PCDH19Q8TAB3 1148 aa15.07■□□□□ 0
CLN6-215ENST00000636674 KLRG1Q96E93 195 aa15.07■□□□□ 0
CLN6-215ENST00000636674 SIGLEC10Q96LC7 697 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ACAP3Q96P50 834 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ZNF184Q99676 751 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 YIPF3Q9GZM5 350 aa15.07■□□□□ 0
CLN6-215ENST00000636674 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 STN1Q9H668 368 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 SPATS2LQ9NUQ6 558 aaKnown RBP15.07■□□□□ 0
CLN6-215ENST00000636674 BARX2Q9UMQ3 279 aaPredicted RBP15.07■□□□□ 0
CLN6-215ENST00000636674 HMX2A2RU54 273 aa15.06■□□□□ 0
CLN6-215ENST00000636674 LACTBL1A8MY62 500 aa15.06■□□□□ 0
CLN6-215ENST00000636674 SPECC1L-ADORA2AF8WAN1 911 aa15.06■□□□□ 0
CLN6-215ENST00000636674 INO80B-WBP1J3KQ70 363 aa15.06■□□□□ 0
CLN6-215ENST00000636674 MAP3K7O43318 606 aa15.06■□□□□ 0
CLN6-215ENST00000636674 GCATO75600 419 aa15.06■□□□□ 0
CLN6-215ENST00000636674 APRTP07741 180 aa15.06■□□□□ 0
CLN6-215ENST00000636674 MCF2P10911 925 aa15.06■□□□□ 0
CLN6-215ENST00000636674 CYP3A5P20815 502 aa15.06■□□□□ 0
CLN6-215ENST00000636674 MXRA7P84157 204 aa15.06■□□□□ 0
CLN6-215ENST00000636674 FAM187BQ17R55 369 aa15.06■□□□□ 0
CLN6-215ENST00000636674 CCDC14Q49A88 953 aa15.06■□□□□ 0
CLN6-215ENST00000636674 RAB6CQ53S08 254 aa15.06■□□□□ 0
CLN6-215ENST00000636674 JADE1Q6IE81 842 aa15.06■□□□□ 0
CLN6-215ENST00000636674 OR52E8Q6IFG1 317 aa15.06■□□□□ 0
CLN6-215ENST00000636674 MYLK4Q86YV6 388 aaPredicted RBP15.06■□□□□ 0
CLN6-215ENST00000636674 SCUBE1Q8IWY4 988 aa15.06■□□□□ 0
CLN6-215ENST00000636674 FAM161BQ96MY7 647 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms