RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CCDC138	Q96M89	665 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	NDEL1	Q9GZM8	345 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	INTS2	Q9H0H0	1204 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	VTA1	Q9NP79	307 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SIX2	Q9NPC8	291 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC38A7	Q9NVC3	462 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	EPS15L1	Q9UBC2	864 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC9A2	Q9UBY0	812 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	SCAF8	Q9UPN6	1271 aa	Known RBP	11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	AFG3L2	Q9Y4W6	797 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	NOX1	Q9Y5S8	564 aa		11.16	□□□□□ -0.62
CHD2-223	ENST00000636306	IGSF9B	Q9UPX0	1349 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	ZBTB39	O15060	712 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	PMM2	O15305	246 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	CAPN15	O75808	1086 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	DGAT1	O75907	488 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	MAGEA4	P43358	317 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	IREB2	P48200	963 aa	Known RBP	11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	GSS	P48637	474 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	C21orf59	P57076	290 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	KCNA1	Q09470	495 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM132B	Q14DG7	1078 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	STXBP2	Q15833	593 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	KCTD21	Q4G0X4	260 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	FAM102B	Q5T8I3	360 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	RNF111	Q6ZNA4	994 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	SULF1	Q8IWU6	871 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	PTCD2	Q8WV60	388 aa	Known RBP	11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	ARHGEF26	Q96DR7	871 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	DCUN1D1	Q96GG9	259 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	PLEKHA8	Q96JA3	519 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	LRGUK	Q96M69	825 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	NUF2	Q9BZD4	464 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	C10orf88	Q9H8K7	445 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	APEX2	Q9UBZ4	518 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	CLEC11A	Q9Y240	323 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	ITM2B	Q9Y287	266 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	PTPN22	Q9Y2R2	807 aa		11.15	□□□□□ -0.62
CHD2-223	ENST00000636306	KLF11	O14901	512 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	ENO1	P06733	434 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	FGFR1	P11362	822 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	TNFAIP3	P21580	790 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	STT3A	P46977	705 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	ALDH1A3	P47895	512 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	KCNJ1	P48048	391 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	VAMP7	P51809	220 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	HNRNPF	P52597	415 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	BTK	Q06187	659 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	DGKZ	Q13574	1117 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	CCNI	Q14094	377 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	PHKG1	Q16816	387 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	GRAMD1B	Q3KR37	738 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	TMEM214	Q6NUQ4	689 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	DNAAF5	Q86Y56	855 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	MAP4K3	Q8IVH8	894 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	ZCCHC9	Q8N567	271 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	TERB1	Q8NA31	727 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	PPP4R1	Q8TF05	950 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	USP6NL	Q92738	828 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	CD101	Q93033	1021 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	PRR11	Q96HE9	360 aa	Predicted RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	TDRD1	Q9BXT4	1180 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	TUT1	Q9H6E5	874 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	KMT5A	Q9NQR1	393 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	DNAJC17	Q9NVM6	304 aa	Known RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	SOX13	Q9UN79	622 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	ERVK-11	Q9UQG0	969 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	PPME1	Q9Y570	386 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	LCT	P09848	1927 aa		11.14	□□□□□ -0.63
CHD2-223	ENST00000636306	AQP9	O43315	295 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SULT1C4	O75897	302 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CRTAM	O95727	393 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CCNE2	O96020	404 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SRGAP2C	P0DJJ0	459 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SRGAP2B	P0DMP2	458 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	RBP3	P10745	1247 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	THRA	P10827	490 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	MYL2	P10916	166 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ATP6V1B1	P15313	513 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	KCNA2	P16389	499 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ENDOU	P21128	410 aa	Known RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ICAM3	P32942	547 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PEX3	P56589	373 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PRKD1	Q15139	912 aa	Predicted RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ZNF394	Q53GI3	561 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	XKR3	Q5GH77	459 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	AADACL2	Q6P093	401 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PGM2L1	Q6PCE3	622 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	MINDY2	Q8NBR6	621 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ADCY4	Q8NFM4	1077 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	KRT35	Q92764	455 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CLIP3	Q96DZ5	547 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CEP170P1	Q96L14	293 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PSD2	Q9BQI7	771 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC2A11	Q9BYW1	496 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	NMUR2	Q9GZQ4	415 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	WWP1	Q9H0M0	922 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.13	□□□□□ -0.63

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