RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 MXI1P50539 228 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 PMS1P54277 932 aaKnown RBP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 RAD23BP54727 409 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ELF2Q15723 593 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CBWD6Q4V339 395 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 USP39Q53GS9 565 aaKnown RBP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 PPM1JQ5JR12 505 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CBWD3Q5JTY5 395 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CBWD5Q5RIA9 395 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 STPG1Q5TH74 334 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ZNF658Q5TYW1 1059 aaPredicted RBP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 PMS2CLQ68D20 193 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ANKRD40Q6AI12 368 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 TCEAL6Q6IPX3 200 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 Q6ZNB5 142 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 C11orf74Q86VG3 221 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 NAT16Q8N8M0 369 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 FBXL13Q8NEE6 735 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 KCNV2Q8TDN2 545 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 TATDN2Q93075 761 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 TCEAL3Q969E4 200 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 JAKMIP2Q96AA8 810 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 HEXIM2Q96MH2 286 aaKnown RBP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 GSDMAQ96QA5 445 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ARID3AQ99856 593 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 UBXN6Q9BZV1 441 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 NACA2Q9H009 215 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 FAM124BQ9H5Z6 455 aaPredicted RBP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 MMRN2Q9H8L6 949 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CD248Q9HCU0 757 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ZDHHC4Q9NPG8 344 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 RAB20Q9NX57 234 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CLIC5Q9NZA1 410 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 MARK1Q9P0L2 795 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 DEC1Q9P2X7 70 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 NUDT5Q9UKK9 219 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 INVSQ9Y283 1065 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 STARD13Q9Y3M8 1113 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 CEP192Q8TEP8 1941 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 NBEAQ8NFP9 2946 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 ITPR1Q14643 2758 aa7.71□□□□□ -1.18
CACNA1A-222ENST00000636022 A0A1W2PQF6 199 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 TBC1D3BA6NDS4 549 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 MDM4O15151 490 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 SLC16A3O15427 465 aaKnown RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CACNG3O60359 315 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 STX10O60499 249 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CAVIN2O95810 425 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 KLKB1P03952 638 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CISD3P0C7P0 127 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 EPB41P11171 864 aaKnown RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 TYRP14679 529 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 TRIM21P19474 475 aaKnown RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 GBP1P32455 592 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 PSEN1P49768 467 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 FKBP3Q00688 224 aaKnown RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CREB5Q02930 508 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 PDAP1Q13442 181 aaKnown RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 ANO4Q32M45 955 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 MAP7D1Q3KQU3 841 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 AASDHQ4L235 1098 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 RAB41Q5JT25 222 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 EOGTQ5NDL2 527 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 C10orf120Q5SQS8 335 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 BTBD8Q5XKL5 378 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 ARHGAP17Q68EM7 881 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 TTC39CQ8N584 583 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 FRMD1Q8N878 549 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 TERB1Q8NA31 727 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CCDC150Q8NCX0 1101 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 RLN3Q8WXF3 142 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 ERCC4Q92889 916 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 SLC35C1Q96A29 364 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 CCDC34Q96HJ3 373 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 RMND1Q9NWS8 449 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 WDR35Q9P2L0 1181 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 MBD1Q9UIS9 605 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 DNMT3LQ9UJW3 386 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 NAGPAQ9UK23 515 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 FBXO10Q9UK96 956 aa7.7□□□□□ -1.18
CACNA1A-222ENST00000636022 LNP1A1A4G5 178 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 TRIM49BA6NDI0 452 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 PRRT4C9JH25 899 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 NEDD8-MDP1E9PL57 170 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 STC2O76061 302 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 ALDH1A2O94788 518 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 PENKP01210 267 aaPredicted RBP7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 GOLGA8FQ08AF8 430 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 GOLGA8DPQ0D2H9 430 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 CUL2Q13617 745 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 PREPLQ4J6C6 727 aaPredicted RBP7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 C10orf76Q5T2E6 689 aa7.69□□□□□ -1.18
CACNA1A-222ENST00000636022 EGFLAMQ63HQ2 1017 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms