RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 GLI1P08151 1106 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 IRF1P10914 325 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 CASP14P31944 242 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 IFNAR2P48551 515 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 COG7P83436 770 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 CENPCQ03188 943 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 KLHL30Q0D2K2 578 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 PDGFRLQ15198 375 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 CLEC16AQ2KHT3 1053 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 EFHC1Q5JVL4 640 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 OR6B2Q6IFH4 312 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 TOGARAM2Q6ZUX3 1019 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 OLIG1Q8TAK6 271 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 HAUS4Q9H6D7 363 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 POPDC2Q9HBU9 364 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 ARHGEF3Q9NR81 526 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 SEPT11Q9NVA2 429 aaKnown RBP21.23■□□□□ 0.99
PTCD3-220ENST00000627371 DUS2Q9NX74 493 aaKnown RBP21.23■□□□□ 0.99
PTCD3-220ENST00000627371 CA14Q9ULX7 337 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 SH3BP1Q9Y3L3 701 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 WNT6Q9Y6F9 365 aa21.23■□□□□ 0.99
PTCD3-220ENST00000627371 SLC9A3R1O14745 358 aaPredicted RBP21.22■□□□□ 0.99
PTCD3-220ENST00000627371 HSF2BPO75031 334 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 NCAM1P13591 858 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 MMP8P22894 467 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 YWHAZP63104 245 aaKnown RBP21.22■□□□□ 0.99
PTCD3-220ENST00000627371 SLC6A3Q01959 620 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 IER5LQ5T953 404 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 TRIM68Q6AZZ1 485 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 SLC26A9Q7LBE3 791 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 XYLT1Q86Y38 959 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 SIX5Q8N196 739 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 CSGALNACT1Q8TDX6 532 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 HPS4Q9NQG7 708 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 HEBP1Q9NRV9 189 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 GTSE1Q9NYZ3 720 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 F5P12259 2224 aa21.22■□□□□ 0.99
PTCD3-220ENST00000627371 MIA3Q5JRA6 1907 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 FAM170AA1A519 330 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 KRBA1A5PL33 1030 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 CAPN9O14815 690 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 GREM1O60565 184 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 STC2O76061 302 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 TNFAIP3P21580 790 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 SCNN1AP37088 669 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 NSFP46459 744 aaKnown RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 PRKCQQ04759 706 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 TNK2Q07912 1038 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 TAF5Q15542 800 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 MLF2Q15773 248 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 EML3Q32P44 896 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 SLC44A4Q53GD3 710 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 MMS22LQ6ZRQ5 1243 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 HTR3DQ70Z44 454 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 ZNF571Q7Z3V5 609 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 PHF13Q86YI8 300 aaPredicted RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 SLC30A5Q8TAD4 765 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 ATP2A3Q93084 1043 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 WBP2Q969T9 261 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 EBF3Q9H4W6 596 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 TBC1D14Q9P2M4 693 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 SFMBT1Q9UHJ3 866 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 LSM7Q9UK45 103 aaKnown RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 NAALADL1Q9UQQ1 740 aa21.21■□□□□ 0.99
PTCD3-220ENST00000627371 BZW2Q9Y6E2 419 aaKnown RBP21.21■□□□□ 0.99
PTCD3-220ENST00000627371 SLC12A8A0AV02 714 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 SCAMP3O14828 347 aaKnown RBP21.2■□□□□ 0.98
PTCD3-220ENST00000627371 TPM1P09493 284 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 SKILP12757 684 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 ARSAP15289 507 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 MLLT6P55198 1093 aaPredicted RBP21.2■□□□□ 0.98
PTCD3-220ENST00000627371 RUNX3Q13761 415 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 ITPRIPL2Q3MIP1 535 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 C2CD6Q53TS8 623 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 HGSNATQ68CP4 663 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 DQX1Q8TE96 717 aaKnown RBP21.2■□□□□ 0.98
PTCD3-220ENST00000627371 PLD4Q96BZ4 506 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 OTUB2Q96DC9 234 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 SLC2A13Q96QE2 648 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 C11orf70Q9BRQ4 267 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 C1QTNF1Q9BXJ1 281 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 C11orf16Q9NQ32 467 aa21.2■□□□□ 0.98
PTCD3-220ENST00000627371 HBS1LQ9Y450 684 aaKnown RBP21.2■□□□□ 0.98
PTCD3-220ENST00000627371 DAB1O75553 588 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 SERPING1P05155 500 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 HMBSP08397 361 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 GLULP15104 373 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
PTCD3-220ENST00000627371 ZNF75DP51815 510 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 PTP4A2Q12974 167 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 ARID5BQ14865 1188 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 TDRD12Q587J7 1177 aaKnown RBP21.19■□□□□ 0.98
PTCD3-220ENST00000627371 FAM102AQ5T9C2 384 aaPredicted RBP21.19■□□□□ 0.98
PTCD3-220ENST00000627371 SYPL2Q5VXT5 272 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 PPP1R2P3Q6NXS1 205 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 BBS7Q8IWZ6 715 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 CPA6Q8N4T0 437 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 MSANTD3Q96H12 275 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 MRFAP1L1Q96HT8 127 aa21.19■□□□□ 0.98
PTCD3-220ENST00000627371 SHDQ96IW2 340 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms