RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 BBS2Q9BXC9 721 aa20.2■□□□□ 0.82
ATG4B-226ENST00000625810 DNAJC17Q9NVM6 304 aaKnown RBP20.2■□□□□ 0.82
ATG4B-226ENST00000625810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.2■□□□□ 0.82
ATG4B-226ENST00000625810 WDR35Q9P2L0 1181 aa20.2■□□□□ 0.82
ATG4B-226ENST00000625810 MAP1BP46821 2468 aaKnown RBP20.2■□□□□ 0.82
ATG4B-226ENST00000625810 NEDD8-MDP1E9PL57 170 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 MAP3K13O43283 966 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 NUCB2P80303 420 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 FKBP3Q00688 224 aaKnown RBP20.19■□□□□ 0.82
ATG4B-226ENST00000625810 RNF43Q68DV7 783 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 KLHDC10Q6PID8 442 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 CCDC186Q7Z3E2 898 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 TERB1Q8NA31 727 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 OLIG1Q8TAK6 271 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 KCNV2Q8TDN2 545 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 HMGB4Q8WW32 186 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 TATDN2Q93075 761 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 SMARCE1Q969G3 411 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 SPACA7Q96KW9 195 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 HOOK1Q9UJC3 728 aaKnown RBP20.19■□□□□ 0.82
ATG4B-226ENST00000625810 CEP295Q9C0D2 2601 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 NUP205Q92621 2012 aa20.19■□□□□ 0.82
ATG4B-226ENST00000625810 TCRBV21S2A2A0A5A6 115 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 TRIM24O15164 1050 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
ATG4B-226ENST00000625810 GREM1O60565 184 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 ADAM23O75077 832 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 TYRP14679 529 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 DHPSP49366 369 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-226ENST00000625810 RAD23BP54727 409 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 SLC8A3P57103 927 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 N4BP2L1Q5TBK1 243 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-226ENST00000625810 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 SCD5Q86SK9 330 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 MIB1Q86YT6 1006 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 SLC4A11Q8NBS3 891 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 RLN3Q8WXF3 142 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 CDK5RAP1Q96SZ6 601 aaKnown RBP20.18■□□□□ 0.82
ATG4B-226ENST00000625810 ARID3AQ99856 593 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 EDEM2Q9BV94 578 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 LSM14BQ9BX40 385 aaKnown RBP20.18■□□□□ 0.82
ATG4B-226ENST00000625810 USP3Q9Y6I4 520 aa20.18■□□□□ 0.82
ATG4B-226ENST00000625810 LNP1A1A4G5 178 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 BYSLQ13895 437 aaKnown RBP20.17■□□□□ 0.82
ATG4B-226ENST00000625810 COBLL1Q53SF7 1204 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 SDE2Q6IQ49 451 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 CYP2U1Q7Z449 544 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 ERCC4Q92889 916 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-226ENST00000625810 GTPBP4Q9BZE4 634 aaKnown RBP20.17■□□□□ 0.82
ATG4B-226ENST00000625810 FAM124BQ9H5Z6 455 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-226ENST00000625810 CLIC5Q9NZA1 410 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 RASAL2Q9UJF2 1139 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 USP24Q9UPU5 2620 aa20.17■□□□□ 0.82
ATG4B-226ENST00000625810 ZBTB24O43167 697 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-226ENST00000625810 CACNG3O60359 315 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 PMLP29590 882 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 P2RY2P41231 377 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 WASP42768 502 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 COG7P83436 770 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 STIM1Q13586 685 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 CBWD6Q4V339 395 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 CBWD3Q5JTY5 395 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 CBWD5Q5RIA9 395 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ARHGAP17Q68EM7 881 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 LPCAT2Q7L5N7 544 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 PIGZQ86VD9 579 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ARHGAP18Q8N392 663 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ZNF276Q8N554 614 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ENGASEQ8NFI3 743 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 BHMTQ93088 406 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 UBXN6Q9BZV1 441 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 MARK1Q9P0L2 795 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ARMCX3Q9UH62 379 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-226ENST00000625810 ZNF510Q9Y2H8 683 aa20.16■□□□□ 0.82
ATG4B-226ENST00000625810 KHNYNO15037 678 aaKnown RBP20.15■□□□□ 0.82
ATG4B-226ENST00000625810 STC2O76061 302 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 KCNK5O95279 499 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 HMBSP08397 361 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 HOXB2P14652 356 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 NTSR1P30989 418 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 PMS1P54277 932 aaKnown RBP20.15■□□□□ 0.82
ATG4B-226ENST00000625810 YWHAEP62258 255 aaKnown RBP20.15■□□□□ 0.82
ATG4B-226ENST00000625810 LRRC63Q05C16 580 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 EFEMP1Q12805 493 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 RSRC2Q7L4I2 434 aaKnown RBP20.15■□□□□ 0.82
ATG4B-226ENST00000625810 ANKRD52Q8NB46 1076 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 PIGKQ92643 395 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 TIGD1Q96MW7 591 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 HCN2Q9UL51 889 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 STARD13Q9Y3M8 1113 aa20.15■□□□□ 0.82
ATG4B-226ENST00000625810 ZFHX4Q86UP3 3567 aa20.14■□□□□ 0.82
ATG4B-226ENST00000625810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 TRIM49BA6NDI0 452 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 C4orf47A7E2U8 309 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 PATE3B3GLJ2 98 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 KRT37O76014 449 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 CD19P15391 556 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 DGKGP49619 791 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 LRMPQ12912 555 aa20.14■□□□□ 0.81
ATG4B-226ENST00000625810 CUL2Q13617 745 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms