RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PDK2Q15119 407 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 LHX8Q68G74 356 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 ZBED8Q8IZ13 594 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 KIRREL3Q8IZU9 778 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 MYCBPAPQ8TBZ2 947 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 DEFB118Q96PH6 123 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 SMOQ99835 787 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 TXLNGYQ9BZA5 131 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.33□□□□□ -0.76
VTA1-205ENST00000620996 UNC93B1Q9H1C4 597 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 UBN1Q9NPG3 1134 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 NRP1O14786 923 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 ARL4AP40617 200 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 SYPL2Q5VXT5 272 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 CYP4V2Q6ZWL3 525 aaPredicted RBP10.33□□□□□ -0.76
VTA1-205ENST00000620996 SLC24A5Q71RS6 500 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 SLC35B2Q8TB61 432 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
VTA1-205ENST00000620996 SMARCD1Q96GM5 515 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 EPB41L4BQ9H329 900 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 PCDH9Q9HC56 1237 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 LRFN2Q9ULH4 789 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 DRG1Q9Y295 367 aaKnown RBP10.33□□□□□ -0.76
VTA1-205ENST00000620996 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 E7ENQ6 273 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 ARVCFO00192 962 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 GRIK1P39086 918 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 NKX3-2P78367 333 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 ADCY1Q08828 1119 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 TRMT10CQ7L0Y3 403 aaKnown RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 SPATA2LQ8IUW3 424 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 STKLD1Q8NE28 680 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 PCDH19Q8TAB3 1148 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 RSPH1Q8WYR4 309 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 ABI2Q9NYB9 513 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 NINJ2Q9NZG7 142 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 TADA2AO75478 443 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 GOT1P17174 413 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 AMPD1P23109 780 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 RPL22P35268 128 aaKnown RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 MAGEA4P43358 317 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 PTPN9P43378 593 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 YWHAHQ04917 246 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 PDIA2Q13087 525 aaKnown RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 BBS9Q3SYG4 887 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 NOMO2Q5JPE7 1267 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 HIBCHQ6NVY1 386 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 RTN4RL1Q86UN2 441 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 PPP1R12CQ9BZL4 782 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 POPDC2Q9HBU9 364 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 TMEM30AQ9NV96 361 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 TMLHEQ9NVH6 421 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 DDIT4Q9NX09 232 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 SEPT10Q9P0V9 454 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 DAB1O75553 588 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 SKAP2O75563 359 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 DDHD2O94830 711 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 RBL1P28749 1068 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 GATMP50440 423 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 CCL23P55773 120 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 GAD2Q05329 585 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 INTS6LQ5JSJ4 861 aaKnown RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 DRICH1Q6PGQ1 229 aaPredicted RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 LIMS2Q7Z4I7 341 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 PLD5Q8N7P1 536 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 OR10T2Q8NGX3 314 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 PGLYRP2Q96PD5 576 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 DNAJB4Q9UDY4 337 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 EFR3BQ9Y2G0 817 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 MFHAS1Q9Y4C4 1052 aa10.32□□□□□ -0.76
VTA1-205ENST00000620996 MRPL42Q9Y6G3 142 aaKnown RBP10.32□□□□□ -0.76
VTA1-205ENST00000620996 POC1B-GALNT4F8VUJ3 575 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TP73O15350 636 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 IFI35P80217 286 aaPredicted RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 GBE1Q04446 702 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FASTKD3Q14CZ7 662 aaKnown RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 SLC39A12Q504Y0 691 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CLLU1OSQ5K130 101 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 ANKRD22Q5VYY1 191 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 RHBDF2Q6PJF5 856 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 DCLRE1AQ6PJP8 1040 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CENPUQ71F23 418 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TAX1BP1Q86VP1 789 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 ZCCHC9Q8N567 271 aaKnown RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FAF2Q96CS3 445 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 SCLYQ96I15 445 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FAM129AQ9BZQ8 928 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 ADAM7Q9H2U9 754 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 NRDE2Q9H7Z3 1164 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms