RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 WDR36Q8NI36 951 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PPP1R10Q96QC0 940 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 NCKIPSDQ9NZQ3 722 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF609O15014 1411 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 IQGAP1P46940 1657 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 H7C0S8 307 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MTA2O94776 668 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 LSM8O95777 96 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 STRA8Q7Z7C7 330 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ISCUQ9H1K1 167 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 VTA1Q9NP79 307 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ITGA11Q9UKX5 1188 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 POLR1DQ9Y2S0 133 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MYO5BQ9ULV0 1848 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 TRIM49D1C9J1S8 452 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 RAD51CO43502 376 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 RTN3O95197 1032 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MAPK9P45984 424 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 CCT8P50990 548 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 RAB27AP51159 221 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 PSMD7P51665 324 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 COX10Q12887 443 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 SERHL2Q9H4I8 314 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 SERHLQ9NQF3 203 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 AVENQ9NQS1 362 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 AGPAT3Q9NRZ7 376 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 RBM12Q9NTZ6 932 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 DLC1Q96QB1 1528 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 EIF4E1BA6NMX2 242 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 TSNQ15631 228 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MACC1Q6ZN28 852 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 UXTQ9UBK9 157 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 CENPXA8MT69 81 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ANKRD65E5RJM6 399 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 XYLBO75191 536 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MLH1P40692 756 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 NR2C2P49116 596 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ALDH9A1P49189 494 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ERO1BQ86YB8 467 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 POMGNT2Q8NAT1 580 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 OLFM1Q99784 485 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 KLRC2P26717 231 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 ALG11Q2TAA5 492 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 USP38Q8NB14 1042 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 NT5MQ9NPB1 228 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 KCNQ2O43526 872 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 FLT3P36888 993 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MTF1Q14872 753 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 PRMT9Q6P2P2 845 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 FBXO10Q9UK96 956 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 MBD5Q9P267 1494 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 TRIM24O15164 1050 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 FGFR1P11362 822 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 OLFML2BQ68BL8 750 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM159Q96B96 161 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM118BQ9BPY3 351 aa11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 SAE1Q9UBE0 346 aaPredicted RBP11.48□□□□□ -0.57
CCDC144B-208ENST00000618081 CBX4O00257 560 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 PEX1O43933 1283 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 SKAP2O75563 359 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CCR1P32246 355 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 VHLP40337 213 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 TRIM16LQ309B1 348 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP20A1Q6UW02 462 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 CPB2Q96IY4 423 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 DNAJC1Q96KC8 554 aaKnown RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 NR5A2O00482 541 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 DSG3P32926 999 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 SLC29A2Q14542 456 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 KLHDC7AQ5VTJ3 777 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 TRMT11Q7Z4G4 463 aaKnown RBP11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 S100A13Q99584 98 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MFSD1Q9H3U5 465 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 PHF20L1A8MW92 1017 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 FOXN1O15353 648 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 KRT34O76011 436 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 VTNP04004 478 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 BACE1P56817 501 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 STARD8Q92502 1023 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 USP7Q93009 1102 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 JMJD4Q9H9V9 463 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 IL1RAPL1Q9NZN1 696 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 STON1Q9Y6Q2 735 aa11.47□□□□□ -0.57
CCDC144B-208ENST00000618081 MORC2Q9Y6X9 1032 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms