RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 BNC1Q01954 994 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 KIAA1324Q6UXG2 1013 aaKnown RBP24.76■■□□□ 1.55
MMP28-203ENST00000612672 SLC2A14Q8TDB8 520 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 SYAP1Q96A49 352 aaPredicted RBP24.76■■□□□ 1.55
MMP28-203ENST00000612672 NACA2Q9H009 215 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 NMUR1Q9HB89 426 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 NUDT5Q9UKK9 219 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 MTMR6Q9Y217 621 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 ATP8B3O60423 1300 aa24.76■■□□□ 1.55
MMP28-203ENST00000612672 LRRIQ3A6PVS8 624 aaPredicted RBP24.75■■□□□ 1.55
MMP28-203ENST00000612672 KCNJ18B7U540 433 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 CYP26A1O43174 497 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 MAP3K7CLP57077 242 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 ZNF699Q32M78 642 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 PREPLQ4J6C6 727 aaPredicted RBP24.75■■□□□ 1.55
MMP28-203ENST00000612672 SOWAHCQ53LP3 525 aaPredicted RBP24.75■■□□□ 1.55
MMP28-203ENST00000612672 CCNI2Q6ZMN8 369 aaPredicted RBP24.75■■□□□ 1.55
MMP28-203ENST00000612672 C12orf29Q8N999 325 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 MDM1Q8TC05 714 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 DHX58Q96C10 678 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 CSNK1G1Q9HCP0 422 aa24.75■■□□□ 1.55
MMP28-203ENST00000612672 HHLA1C9JL84 531 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 NASPP49321 788 aaPredicted RBP24.74■■□□□ 1.55
MMP28-203ENST00000612672 SLC14A1Q13336 389 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 COL28A1Q2UY09 1125 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 FUT11Q495W5 492 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 CNNM4Q6P4Q7 775 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 Q6ZNB5 142 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 ZCCHC9Q8N567 271 aaKnown RBP24.74■■□□□ 1.55
MMP28-203ENST00000612672 MKRN2Q9H000 416 aaKnown RBP24.74■■□□□ 1.55
MMP28-203ENST00000612672 CYLDQ9NQC7 956 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 FAM49BQ9NUQ9 324 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 COMMD8Q9NX08 183 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 UBE4BO95155 1302 aa24.74■■□□□ 1.55
MMP28-203ENST00000612672 NDUFS2O75306 463 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 C4BPAP04003 597 aaKnown RBP24.73■■□□□ 1.55
MMP28-203ENST00000612672 DGKGP49619 791 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 BIRC3Q13489 604 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 HNRNPDQ14103 355 aaKnown RBP24.73■■□□□ 1.55
MMP28-203ENST00000612672 ZNF667Q5HYK9 610 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 NUDT18Q6ZVK8 323 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 MARCH9Q86YJ5 346 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 JAKMIP2Q96AA8 810 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 TOE1Q96GM8 510 aaKnown RBP24.73■■□□□ 1.55
MMP28-203ENST00000612672 XPO6Q96QU8 1125 aaKnown RBP24.73■■□□□ 1.55
MMP28-203ENST00000612672 TWNKQ96RR1 684 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 USP36Q9P275 1121 aaKnown RBP24.73■■□□□ 1.55
MMP28-203ENST00000612672 FBXO10Q9UK96 956 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 PCOLCE2Q9UKZ9 415 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 SLCO1B1Q9Y6L6 691 aa24.73■■□□□ 1.55
MMP28-203ENST00000612672 PHACTR2O75167 634 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 CD6P30203 668 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 RDXP35241 583 aaKnown RBP24.72■■□□□ 1.55
MMP28-203ENST00000612672 NDST1P52848 882 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 DLG4P78352 724 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 NCOA4Q13772 614 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 BMT2Q1RMZ1 405 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 SPOPLQ6IQ16 392 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 SDE2Q6IQ49 451 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 PDZD3Q86UT5 571 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 C12orf56Q8IXR9 622 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 LINC00301Q8NCQ3 95 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 PARD3BQ8TEW8 1205 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 DNASE2BQ8WZ79 361 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 TNIP3Q96KP6 325 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 C7orf25Q9BPX7 421 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 BLZF1Q9H2G9 400 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 FAM124BQ9H5Z6 455 aaPredicted RBP24.72■■□□□ 1.55
MMP28-203ENST00000612672 TLR8Q9NR97 1041 aaKnown RBP24.72■■□□□ 1.55
MMP28-203ENST00000612672 TOR4AQ9NXH8 423 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 WSB2Q9NYS7 404 aaPredicted RBP24.72■■□□□ 1.55
MMP28-203ENST00000612672 WDR35Q9P2L0 1181 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 STON1Q9Y6Q2 735 aa24.72■■□□□ 1.55
MMP28-203ENST00000612672 MUC22E2RYF6 1773 aaPredicted RBP24.72■■□□□ 1.55
MMP28-203ENST00000612672 CABIN1Q9Y6J0 2220 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 A0A1W2PQH9 124 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 PDCP20941 246 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 ADORA2BP29275 332 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 IL12RB1P42701 662 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 CLDN10P78369 228 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 SHC4Q6S5L8 630 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 CLEC20AQ6ZU45 233 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 BBC3Q96PG8 261 aaPredicted RBP24.71■■□□□ 1.55
MMP28-203ENST00000612672 GPR174Q9BXC1 333 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 SLC39A2Q9NP94 309 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 SUSD2Q9UGT4 822 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 FNDC3AQ9Y2H6 1198 aaKnown RBP24.71■■□□□ 1.55
MMP28-203ENST00000612672 PCDHB9Q9Y5E1 797 aa24.71■■□□□ 1.55
MMP28-203ENST00000612672 TP53BP1Q12888 1972 aaPredicted RBP24.71■■□□□ 1.55
MMP28-203ENST00000612672 CLSTN1O94985 981 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 KLKB1P03952 638 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 ATP5C1P36542 298 aaKnown RBP24.7■■□□□ 1.54
MMP28-203ENST00000612672 GEN1Q17RS7 908 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 UNC13DQ70J99 1090 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 CRYBG2Q8N1P7 616 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 BAHD1Q8TBE0 780 aaPredicted RBP24.7■■□□□ 1.54
MMP28-203ENST00000612672 FBXO44Q9H4M3 255 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.7■■□□□ 1.54
MMP28-203ENST00000612672 SCML2Q9UQR0 700 aa24.7■■□□□ 1.54
MMP28-203ENST00000612672 GOLGA4Q13439 2230 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms