RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 STRADAQ7RTN6 431 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 DNAJB7Q7Z6W7 309 aaPredicted RBP18.3■□□□□ 0.52
SREK1-216ENST00000612404 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
SREK1-216ENST00000612404 MS4A14Q96JA4 679 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 NCAPGQ9BPX3 1015 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 CARD9Q9H257 536 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 DDIT4Q9NX09 232 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 TRUB2O95900 331 aaKnown RBP18.29■□□□□ 0.52
SREK1-216ENST00000612404 KRT7P08729 469 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 PSEN1P49768 467 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 SMAD3P84022 425 aaKnown RBP18.29■□□□□ 0.52
SREK1-216ENST00000612404 OTUD1Q5VV17 481 aaPredicted RBP18.29■□□□□ 0.52
SREK1-216ENST00000612404 BEND5Q7L4P6 421 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 ITIH5Q86UX2 942 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 RFXAPO00287 272 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 PYGMP11217 842 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 RARGP13631 454 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
SREK1-216ENST00000612404 AADACL2Q6P093 401 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 POLNQ7Z5Q5 900 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 ADGRD2Q7Z7M1 963 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 FAM131BQ86XD5 332 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 CCDC50Q8IVM0 306 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 KATNAL2Q8IYT4 538 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 DQX1Q8TE96 717 aaKnown RBP18.29■□□□□ 0.52
SREK1-216ENST00000612404 HSPH1Q92598 858 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 PSMG2Q969U7 264 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 PEBP4Q96S96 227 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 L2HGDHQ9H9P8 463 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 MAN1C1Q9NR34 630 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.29■□□□□ 0.52
SREK1-216ENST00000612404 SMARCAL1Q9NZC9 954 aa18.29■□□□□ 0.52
SREK1-216ENST00000612404 KRT1P04264 644 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 RALAP11233 206 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 EPCAMP16422 314 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 WHAMMP3Q1A5X7 153 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 PPM1LQ5SGD2 360 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 TAC4Q86UU9 113 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 ELMOD1Q8N336 334 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 MYRFLQ96LU7 910 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 PRO3102Q9H379 93 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 PIGVQ9NUD9 493 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 DDX56Q9NY93 547 aaKnown RBP18.28■□□□□ 0.52
SREK1-216ENST00000612404 CLIC5Q9NZA1 410 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 SFMBT1Q9UHJ3 866 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 PI4K2BG5E9Z4 385 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 CES2O00748 559 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 ZRANB2O95218 330 aaKnown RBP eCLIP18.28■□□□□ 0.524e-7■■■□□ 15.5
SREK1-216ENST00000612404 SND1Q7KZF4 910 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREK1-216ENST00000612404 TRMT2BQ96GJ1 504 aaKnown RBP18.28■□□□□ 0.52
SREK1-216ENST00000612404 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 TLE6Q9H808 572 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREK1-216ENST00000612404 UXTQ9UBK9 157 aaPredicted RBP18.28■□□□□ 0.52
SREK1-216ENST00000612404 ASB3Q9Y575 518 aa18.28■□□□□ 0.52
SREK1-216ENST00000612404 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.52
SREK1-216ENST00000612404 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 CCL16O15467 120 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 ENDOD1O94919 500 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 F9P00740 461 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 RARAP10276 462 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 GBP1P32455 592 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 LLGL1Q15334 1064 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 C10orf120Q5SQS8 335 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 SLC22A17Q8WUG5 538 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 CASP10Q92851 521 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 RNF34Q969K3 372 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 RNF25Q96BH1 459 aaPredicted RBP18.27■□□□□ 0.52
SREK1-216ENST00000612404 TRPM5Q9NZQ8 1165 aa18.27■□□□□ 0.52
SREK1-216ENST00000612404 LRRD1A4D1F6 860 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 TBX18O95935 607 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 ZDHHC11BP0C7U3 371 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 PAFAH1B1P43034 410 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 EFEMP1Q12805 493 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 BOLA3Q53S33 107 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 CYP4V2Q6ZWL3 525 aaPredicted RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 BNIPLQ7Z465 357 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 CCDC185Q8N715 623 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 EXD1Q8NHP7 514 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 RAPGEF5Q92565 580 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 PGAP3Q96FM1 320 aaPredicted RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 SMOC2Q9H3U7 446 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 CCSER2Q9H7U1 834 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.26■□□□□ 0.51
SREK1-216ENST00000612404 GPATCH2LQ9NWQ4 482 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 ZNF840PA6NDX5 716 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 MSI1O43347 362 aaKnown RBP18.26■□□□□ 0.51
SREK1-216ENST00000612404 TLR5O60602 858 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 RFPL2O75678 378 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 FGGP02679 453 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 NRIP1P48552 1158 aa18.26■□□□□ 0.51
SREK1-216ENST00000612404 MLLT1Q03111 559 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms