RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NT5MQ9NPB1 228 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 LATS2Q9NRM7 1088 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CBX4O00257 560 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TSPAN1O60635 241 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 FKTNO75072 461 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 USP12O75317 370 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 RPSAP08865 295 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 MYBL2P10244 700 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 WEE1P30291 646 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TBX4P57082 545 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 MMRN1Q13201 1228 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CRHR2Q13324 411 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PDAP1Q13442 181 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PTPN20Q4JDL3 420 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 NPNTQ6UXI9 565 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PHF13Q86YI8 300 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ANKRD52Q8NB46 1076 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 NETO2Q8NC67 525 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 KAT2BQ92831 832 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 FBXO44Q9H4M3 255 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 DYRK4Q9NR20 520 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TLR8Q9NR97 1041 aaKnown RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 BAG5Q9UL15 447 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PADI3Q9ULW8 664 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ADGRA3Q8IWK6 1321 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CES2O00748 559 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 SLC8A1P32418 973 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ELK3P41970 407 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 AMPD2Q01433 879 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 TMC3Q7Z5M5 1100 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CARNMT1Q8N4J0 409 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 HSFY1Q96LI6 401 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 CPXM1Q96SM3 734 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PAFAH2Q99487 392 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-218ENST00000610726 SUN2Q9UH99 717 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 PCDHA2Q9Y5H9 948 aa7.52□□□□□ -1.21
CSDE1-218ENST00000610726 F8W8V4 182 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 APOC4-APOC2K7ER74 178 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 DNALI1O14645 258 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TSPAN3O60637 253 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TRUB2O95900 331 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 APOC2P02655 101 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MYL4P12829 197 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 AKT1P31749 480 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 NOS2P35228 1153 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF143P52747 638 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 PRKCZQ05513 592 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MBTD1Q05BQ5 628 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 BMPR2Q13873 1038 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MAP7Q14244 749 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ZC3H12AQ5D1E8 599 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 NOMO2Q5JPE7 1267 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TTC39BQ5VTQ0 682 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RFX8Q6ZV50 586 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 DDIASQ8IXT1 998 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC52Q8N7C0 313 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 HTR3CQ8WXA8 447 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 DPF3Q92784 378 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 WNT8BQ93098 351 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CAVIN3Q969G5 261 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 HES6Q96HZ4 224 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SNRNP25Q9BV90 132 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 FAM129AQ9BZQ8 928 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TMBIM4Q9HC24 238 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 VPS28Q9UK41 221 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 VANGL2Q9ULK5 521 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 PCDHB12Q9Y5F1 795 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MYH13Q9UKX3 1938 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 NUP188Q5SRE5 1749 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 RPTORQ8N122 1335 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 O00370 1275 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 STX7O15400 261 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 C22orf31O95567 290 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 MMP8P22894 467 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 GRK4P32298 578 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SCNN1BP51168 640 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 GEMP55040 296 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 KDSRQ06136 332 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 OVGP1Q12889 678 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 POU6F1Q14863 301 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 PCBP1Q15365 356 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TRADDQ15628 312 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ZRANB3Q5FWF4 1079 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 FSCBQ5H9T9 825 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 C9orf57Q5W0N0 161 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CES3Q6UWW8 571 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 LINC00523Q86TU6 105 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 TMEM192Q8IY95 271 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 GRAMD1AQ96CP6 724 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 FGD4Q96M96 766 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 PPCSQ9HAB8 311 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 EPS15L1Q9UBC2 864 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 ARL2BPQ9Y2Y0 163 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 VIRMAQ69YN4 1812 aaKnown RBP7.51□□□□□ -1.21
CSDE1-218ENST00000610726 CRYBG1Q9Y4K1 1723 aa7.51□□□□□ -1.21
CSDE1-218ENST00000610726 NCANO14594 1321 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms