RNA–Protein interactions for RNA: ENST00000610293.1

U1.23-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.23-201ENST00000610293 TMEM176AQ96HP8 235 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 CPB2Q96IY4 423 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 SNX27Q96L92 541 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 NLRP4Q96MN2 994 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 C7orf26Q96N11 449 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 ZMAT2Q96NC0 199 aaKnown RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ANKRD27Q96NW4 1050 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 FAM111AQ96PZ2 611 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 RAB3IPQ96QF0 476 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 SRPK1Q96SB4 655 aaKnown RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 KCTD15Q96SI1 283 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 CYTH2Q99418 400 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 TBCBQ99426 244 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 LPIN3Q9BQK8 851 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 GORASP1Q9BQQ3 440 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 MRPL45Q9BRJ2 306 aaKnown RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 FDXACB1Q9BRP7 624 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ADPGKQ9BRR6 497 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 TRIM56Q9BRZ2 755 aaKnown RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ZNF670Q9BS34 389 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 TSSK1BQ9BXA7 367 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 TMEM120AQ9BXJ8 343 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 FRMD8Q9BZ67 464 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 MAGEB5Q9BZ81 275 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 INO80BQ9C086 356 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 RNPEPQ9H4A4 650 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 SMARCAD1Q9H4L7 1026 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 ASB7Q9H672 318 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 DENND2DQ9H6A0 471 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 NRDE2Q9H7Z3 1164 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 ETNK1Q9HBU6 452 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 NPHS2Q9NP85 383 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 FBXO6Q9NRD1 293 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ETNK2Q9NVF9 386 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 ASNSD1Q9NWL6 643 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 NXF1Q9UBU9 619 aaKnown RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ZFP69BQ9UJL9 534 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 TSPAN16Q9UKR8 245 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 ITGA11Q9UKX5 1188 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 EMCNQ9ULC0 261 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 PLA2G4CQ9UP65 541 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 AGTPBP1Q9UPW5 1226 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 CEP83Q9Y592 693 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 KIF26AQ9ULI4 1882 aaPredicted RBP3.36□□□□□ -1.87
U1.23-201ENST00000610293 ALPK3Q96L96 1907 aa3.36□□□□□ -1.87
U1.23-201ENST00000610293 NINQ8N4C6 2090 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 PRRC2BQ5JSZ5 2229 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 MTCL1Q9Y4B5 1905 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 THSD7BQ9C0I4 1608 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 IQANK1A0A1B0GTG1 560 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 DCAF8L1A6NGE4 600 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 C2orf71A6NGG8 1288 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 A6NHS1 94 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 UNCXA6NJT0 531 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 E7ENQ6 273 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 I6L893 689 aaPredicted RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 PIK3R2O00459 728 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 FCHO1O14526 889 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 CXCL11O14625 94 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 ZNF195O14628 629 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 APOL1O14791 398 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 SPTLC1O15269 473 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 KCNN4O15554 427 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 MFSD11O43934 449 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 PRPSAP2O60256 369 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 LPXNO60711 386 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 GCATO75600 419 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 GRAP2O75791 330 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 ALDH1A2O94788 518 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 METTL18O95568 372 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 AMHP03971 560 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 VTNP04004 478 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 BPGMP07738 259 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 KRT19P08727 400 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 ZNF286BP0CG31 522 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 TROVE2P10155 538 aaKnown RBP eCLIP3.35□□□□□ -1.87
U1.23-201ENST00000610293 RARBP10826 455 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 FGF3P11487 239 aaPredicted RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 ALOX15P16050 662 aaPredicted RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 PDGFRAP16234 1089 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 ATP2A2P16615 1042 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 CYP2F1P24903 491 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 TKTP29401 623 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 SERPINB3P29508 390 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 HOXA11P31270 313 aaPredicted RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 STIP1P31948 543 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 RDXP35241 583 aaKnown RBP3.35□□□□□ -1.87
U1.23-201ENST00000610293 CPOXP36551 454 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 GRIA1P42261 906 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 NUMBP49757 651 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 RGS7P49802 495 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 CSRP3P50461 194 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 TUBP50607 506 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 RAP1GDS1P52306 607 aa3.35□□□□□ -1.87
U1.23-201ENST00000610293 ATXN1P54253 815 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms