RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 HNRNPCP07910 306 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00458-206ENST00000607494 CKMT1AP12532 417 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 IDEP14735 1019 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 UCP3P55916 312 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 POLE2P56282 527 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 KLF9Q13886 244 aaPredicted RBP6.32□□□□□ -1.4
LINC00458-206ENST00000607494 PLAC9Q5JTB6 97 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 ZNF66Q6ZN08 573 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 LRRTM4Q86VH4 590 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 TMTC1Q8IUR5 882 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
LINC00458-206ENST00000607494 C9orf106Q8NAJ2 232 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 SPPL3Q8TCT6 385 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 OTUD7AQ8TE49 926 aaPredicted RBP6.32□□□□□ -1.4
LINC00458-206ENST00000607494 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 SPSB4Q96A44 273 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 FAM136AQ96C01 138 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 NEUROD6Q96NK8 337 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 KATNAL1Q9BW62 490 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 SIK2Q9H0K1 926 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 WASH6PQ9NQA3 447 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 GGA3Q9NZ52 723 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 MID2Q9UJV3 735 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 TMX2Q9Y320 296 aa6.32□□□□□ -1.4
LINC00458-206ENST00000607494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00458-206ENST00000607494 ITIH6Q6UXX5 1313 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 A0A087WZ62 844 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 PPM1DO15297 605 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 SOAT2O75908 522 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 POLBP06746 335 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 PRR35P0CG20 571 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 NDUFB7P17568 137 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 BTF3P20290 206 aaKnown RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 GCLCP48506 637 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 TOB1P50616 345 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 BMPR2Q13873 1038 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 BOP1Q14137 746 aaKnown RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 KCTD2Q14681 263 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 ADCK5Q3MIX3 580 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 ARHGAP15Q53QZ3 475 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 FAAH2Q6GMR7 532 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 SULT6B1Q6IMI4 303 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 USP17L6PQ6QN14 398 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 FAM46DQ8NEK8 389 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 UBE2Q2Q8WVN8 375 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 RUBCNQ92622 972 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 NELL2Q99435 816 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 PYM1Q9BRP8 204 aaKnown RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 HEYLQ9NQ87 328 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 VPS45Q9NRW7 570 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 FLRT1Q9NZU1 646 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 KIF17Q9P2E2 1029 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 HDAC9Q9UKV0 1011 aa6.31□□□□□ -1.4
LINC00458-206ENST00000607494 SCAF8Q9UPN6 1271 aaKnown RBP6.31□□□□□ -1.4
LINC00458-206ENST00000607494 ASNA1O43681 348 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 INMTO95050 263 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 CD4P01730 458 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 JUPP14923 745 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 CNTFP26441 200 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 SLC10A2Q12908 348 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-206ENST00000607494 EFR3AQ14156 821 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 MAPKAPK3Q16644 382 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 FAM110CQ1W6H9 321 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 AMOTQ4VCS5 1084 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 FAM180BQ6P0A1 224 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 KIAA0408Q6ZU52 694 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 GATAD2AQ86YP4 633 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 FTSJ3Q8IY81 847 aaKnown RBP6.3□□□□□ -1.4
LINC00458-206ENST00000607494 ESX1Q8N693 406 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 SEMA6DQ8NFY4 1073 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 PRPF18Q99633 342 aaKnown RBP6.3□□□□□ -1.4
LINC00458-206ENST00000607494 SH2D3AQ9BRG2 576 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 MS4A7Q9GZW8 240 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-206ENST00000607494 SAYSD1Q9NPB0 183 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 ARHGEF3Q9NR81 526 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 SMC4Q9NTJ3 1288 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 HERC5Q9UII4 1024 aaKnown RBP6.3□□□□□ -1.4
LINC00458-206ENST00000607494 CAPN11Q9UMQ6 739 aa6.3□□□□□ -1.4
LINC00458-206ENST00000607494 PRSS47A8MTI9 375 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 TIMM44O43615 452 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 FAM155BO75949 473 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ITGA2BP08514 1039 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 EGR1P18146 543 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ACVR2AP27037 513 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 MPGP29372 298 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ELF1P32519 619 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 SSBP2P81877 361 aaPredicted RBP6.29□□□□□ -1.4
LINC00458-206ENST00000607494 SLC29A2Q14542 456 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ETFDHQ16134 617 aa6.29□□□□□ -1.4
LINC00458-206ENST00000607494 ANKRD45Q5TZF3 282 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms