RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GYG2O15488 501 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 GSC2O15499 205 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 RFPL1O75677 317 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 METTL18O95568 372 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 PTDSS1P48651 473 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 ATXN1P54253 815 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 HDAC4P56524 1084 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 TTLL4Q14679 1199 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 TRIM68Q6AZZ1 485 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 OXNAD1Q96HP4 312 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 ACAP3Q96P50 834 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 LPIN3Q9BQK8 851 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF395Q9H8N7 513 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 DONSONQ9NYP3 566 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 NME7Q9Y5B8 376 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 MAD1L1Q9Y6D9 718 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 DPYSL4O14531 572 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 PPEF2O14830 753 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 PAPSS1O43252 624 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 APOEP02649 317 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 LGALS2P05162 132 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 ABL2P42684 1182 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC6A3Q01959 620 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 GBE1Q04446 702 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF534Q76KX8 674 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 APBB1IPQ7Z5R6 666 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 TEKT4Q8WW24 435 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 FRMD8Q9BZ67 464 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 NMUR2Q9GZQ4 415 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF180Q9UJW8 692 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 KIAA1257Q9ULG3 409 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 C2CD2Q9Y426 696 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 ZSWIM8A7E2V4 1837 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 E7ENQ6 273 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 FCHO1O14526 889 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF286BP0CG31 522 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 CYP2F1P24903 491 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 BST1Q10588 318 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC10A2Q12908 348 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 PKDCCQ504Y2 493 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 LINC01465Q8N7H1 131 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 NLRP7Q8WX94 980 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 LBHD1Q9BQE6 289 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 NRDE2Q9H7Z3 1164 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 LRRC42Q9Y546 428 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 SNX9Q9Y5X1 595 aa20.97■□□□□ 0.95
SHKBP1-225ENST00000600733 KLF11O14901 512 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 TSPAN1O60635 241 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 SKAP2O75563 359 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 PAX7P23759 505 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 GRIA1P42261 906 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 MAGEA6P43360 314 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 TMPRSS15P98073 1019 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 POU5F1BQ06416 359 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 ARHGAP1Q07960 439 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 CBLBQ13191 982 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 HSF5Q4G112 596 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF484Q5JVG2 852 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 MOB2Q70IA6 237 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 ZNF670Q9BS34 389 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 TAS2R1Q9NYW7 299 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 RPL26L1Q9UNX3 145 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 NR2E3Q9Y5X4 410 aa20.96■□□□□ 0.95
SHKBP1-225ENST00000600733 HMX2A2RU54 273 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 TRDMT1O14717 391 aaKnown RBP20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 TOP3BO95985 862 aaKnown RBP20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 IL1BP01584 269 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 SESN3P58005 492 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 MROH9Q5TGP6 573 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 IFNLR1Q8IU57 520 aaPredicted RBP20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 CLEC4CQ8WTT0 213 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 SIGLEC10Q96LC7 697 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 TBCBQ99426 244 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC4A5Q9BY07 1137 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 DCLRE1BQ9H816 532 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 PCMTD2Q9NV79 361 aa20.95■□□□□ 0.95
SHKBP1-225ENST00000600733 I3L4J1 428 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 MDM4O15151 490 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 ESRRAP11474 423 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 KPNB1Q14974 876 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 CHI3L2Q15782 390 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 TMEM110Q86TL2 294 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 GPC2Q8N158 579 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 VPS52Q8N1B4 723 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 SLC35F5Q8WV83 523 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 MCUR1Q96AQ8 359 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 TUBB6Q9BUF5 446 aa20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 DHX35Q9H5Z1 703 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 MARCOQ9UEW3 520 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-225ENST00000600733 F5H423 210 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 HCRTO43612 131 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 MAGEA3P43357 314 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 CPA2P48052 419 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 KRT72Q14CN4 511 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 LGSNQ5TDP6 509 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 ARID3BQ8IVW6 561 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 SH3TC2Q8TF17 1288 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms