RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 TMEM247A6NEH6 219 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 WDR64B1ANS9 1081 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 FBP2O00757 339 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 E2F6O75461 281 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 ECE1P42892 770 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 ZNF252P-AS1Q0IIN9 211 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 CCDC142Q17RM4 750 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 BBS5Q8N3I7 341 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 BHLHE22Q8NFJ8 381 aaPredicted RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 DDI1Q8WTU0 396 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 CMTM5Q96DZ9 223 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 RNPEPQ9H4A4 650 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 THAP1Q9NVV9 213 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 EBF1Q9UH73 591 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 STX16-NPEPL1H3BU86 382 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 KLF11O14901 512 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 DENRO43583 198 aaKnown RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 SEC24DO94855 1032 aaPredicted RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 P4HBP07237 508 aaKnown RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 OCM2P0CE71 109 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 OCMP0CE72 109 aaPredicted RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 XRCC1P18887 633 aaPredicted RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 TRMT10BQ6PF06 316 aaKnown RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 PACS1Q6VY07 963 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 AHI1Q8N157 1196 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
SYDE1-204ENST00000600440 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 PKP2Q99959 881 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 TEKT3Q9BXF9 490 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 SIRPGQ9P1W8 387 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 SLC9A2Q9UBY0 812 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 ARHGAP26Q9UNA1 814 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
SYDE1-204ENST00000600440 SH3PXD2BA1X283 911 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 H7C0C1 242 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 APRTP07741 180 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 CSH1P0DML2 217 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 CSH2P0DML3 217 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 ATP5OP48047 213 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 RELAQ04206 551 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 WASHC5Q12768 1159 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 LGSNQ5TDP6 509 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 C16orf87Q6PH81 154 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 XKR5Q6UX68 686 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 THAP11Q96EK4 314 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PLGRKTQ9HBL7 147 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 LSM1O15116 133 aaKnown RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SPTLC1O15269 473 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 AP1G1O43747 822 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PIM1P11309 404 aaPredicted RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 CD300CQ08708 224 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 DPYSL3Q14195 570 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 EML3Q32P44 896 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PGM2L1Q6PCE3 622 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 MYO1HQ8N1T3 1032 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SLC35B2Q8TB61 432 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 NUF2Q9BZD4 464 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SMYD2Q9NRG4 433 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PIH1D1Q9NWS0 290 aaKnown RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SPATA7Q9P0W8 599 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 RFPL1O75677 317 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 COX4I1P13073 169 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 ACOT2P49753 483 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 THOP1P52888 689 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PDAP1Q13442 181 aaKnown RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 TAF5Q15542 800 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PPP1R2P3Q6NXS1 205 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 ERI1Q8IV48 349 aaKnown RBP16.64■□□□□ 0.25
SYDE1-204ENST00000600440 SLC15A3Q8IY34 581 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 LILRA2Q8N149 483 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 EMC1Q8N766 993 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 MOCOSQ96EN8 888 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 COQ6Q9Y2Z9 468 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 PPME1Q9Y570 386 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
SYDE1-204ENST00000600440 HLA-DRAP01903 254 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 PSMA2P25787 234 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 EIF2B2P49770 351 aaKnown RBP16.63■□□□□ 0.25
SYDE1-204ENST00000600440 IDH3AP50213 366 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 KPNA1P52294 538 aaPredicted RBP16.63■□□□□ 0.25
SYDE1-204ENST00000600440 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 UNC5BQ8IZJ1 945 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 ABRAQ8N0Z2 381 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 OSBPL6Q9BZF3 934 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 TBC1D23Q9NUY8 699 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 ARHGEF37A1IGU5 675 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 J3QRK9 145 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 MCF2LO15068 1137 aa16.63■□□□□ 0.25
SYDE1-204ENST00000600440 NDUFB10O96000 172 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms