RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 KRT9P35527 623 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 UBASH3AP57075 661 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 CDR2Q01850 454 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 EIF4EBP2Q13542 120 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 TAF5Q15542 800 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 ASTLQ6HA08 431 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 BEND5Q7L4P6 421 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 BBS7Q8IWZ6 715 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 PJA1Q8NG27 643 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 PCMTD1Q96MG8 357 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 CDK5RAP1Q96SZ6 601 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 ECT2Q9H8V3 914 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 LTB4R2Q9NPC1 389 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 ST7Q9NRC1 585 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 ABCC13Q9NSE7 274 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 IFNKQ9P0W0 207 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 MYO6Q9UM54 1294 aa20.42■□□□□ 0.86
SHKBP1-221ENST00000599833 USP34Q70CQ2 3546 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 CYP17A1P05093 508 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 IRF1P10914 325 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 GABRB2P47870 512 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 TPM4P67936 248 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 EFEMP1Q12805 493 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 BTBD8Q5XKL5 378 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 FAM183BPQ6ZVS7 135 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 MIB1Q86YT6 1006 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 RNF214Q8ND24 703 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 FLCNQ8NFG4 579 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 C8orf33Q9H7E9 229 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 RASAL2Q9UJF2 1139 aa20.41■□□□□ 0.86
SHKBP1-221ENST00000599833 LRRC53A6NM62 1247 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 LSM8O95777 96 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 IGLV3-25P01717 112 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 IGLV3-27P01718 113 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 UNGP13051 313 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 AVPR2P30518 371 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 GJA4P35212 333 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 IFNAR2P48551 515 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 PTP4A2Q12974 167 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 TRIP4Q15650 581 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 SYPL2Q5VXT5 272 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 CC2D1AQ6P1N0 951 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 RHBDF2Q6PJF5 856 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 TADA2BQ86TJ2 420 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 RALGPS2Q86X27 583 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 GAS2L3Q86XJ1 694 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 TMEM35BQ8NCS4 154 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 TTC16Q8NEE8 873 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 CSGALNACT1Q8TDX6 532 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 EZH1Q92800 747 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 ATP2A3Q93084 1043 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 MSANTD3Q96H12 275 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 SHDQ96IW2 340 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 SLC2A13Q96QE2 648 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 OSBPL6Q9BZF3 934 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 XPO4Q9C0E2 1151 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 FBRSL1Q9HCM7 1045 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 MARCH2Q9P0N8 246 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 SFMBT1Q9UHJ3 866 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 NAALADL1Q9UQQ1 740 aa20.4■□□□□ 0.86
SHKBP1-221ENST00000599833 GFRA2O00451 464 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 PITX1P78337 314 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 DHCR24Q15392 516 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 FAM217AQ8IXS0 508 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 CLDN23Q96B33 292 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 ADAM33Q9BZ11 813 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 NACA2Q9H009 215 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 MFSD1Q9H3U5 465 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 OLA1Q9NTK5 396 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 ASNSD1Q9NWL6 643 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 CACNA1HO95180 2353 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 CACNA1IQ9P0X4 2223 aa20.39■□□□□ 0.85
SHKBP1-221ENST00000599833 FAM170AA1A519 330 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 MSI1O43347 362 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 CHRM1P11229 460 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 CHRNB1P11230 501 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 OPRD1P41143 372 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 MESP2Q0VG99 397 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 C2CD6Q53TS8 623 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 OTUD1Q5VV17 481 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 ZNF852Q6ZMS4 543 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 CACNA2D4Q7Z3S7 1137 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 XYLT1Q86Y38 959 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 FMNL3Q8IVF7 1028 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 DQX1Q8TE96 717 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 CPA5Q8WXQ8 436 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 FAM3CQ92520 227 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 OTUB2Q96DC9 234 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 AIPL1Q9NZN9 384 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 SH3BP1Q9Y3L3 701 aa20.38■□□□□ 0.85
SHKBP1-221ENST00000599833 ITIH6Q6UXX5 1313 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 A0A1W2PQJ5 194 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 SLC12A8A0AV02 714 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 FAM170BA6NMN3 283 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 MAN2B1O00754 1011 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 TRDMT1O14717 391 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 SART1O43290 800 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 NFATC1O95644 943 aa20.37■□□□□ 0.85
SHKBP1-221ENST00000599833 GYPCP04921 128 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms