RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
SH2D3A-208ENST00000599563 CNTN6Q9UQ52 1028 aa13.48□□□□□ -0.25
SH2D3A-208ENST00000599563 SCML2Q9UQR0 700 aa13.48□□□□□ -0.25
SH2D3A-208ENST00000599563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
SH2D3A-208ENST00000599563 VPS13AQ96RL7 3174 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 OTOL1A6NHN0 477 aaPredicted RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 ADH1CP00326 375 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 TDGF1P13385 188 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 ADORA2BP29275 332 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 SOX5P35711 763 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 SATB1Q01826 763 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 GAS6Q14393 721 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 FSTL4Q6MZW2 842 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 TSSK4Q6SA08 328 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 FAM71AQ8IYT1 594 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 ZMIZ2Q8NF64 920 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 OLIG1Q8TAK6 271 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 ACDQ96AP0 544 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 TMEM176AQ96HP8 235 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 HEXIM2Q96MH2 286 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 DUSP16Q9BY84 665 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 UBXN6Q9BZV1 441 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 RBM12Q9NTZ6 932 aaKnown RBP13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 SMPD4Q9NXE4 827 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 GMIPQ9P107 970 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 KIAA1257Q9ULG3 409 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 SH3BP1Q9Y3L3 701 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 MYO15AQ9UKN7 3530 aa13.47□□□□□ -0.25
SH2D3A-208ENST00000599563 ATG2BQ96BY7 2078 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 FAM170AA1A519 330 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 COCHO43405 550 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 TLR5O60602 858 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 BEST1O76090 585 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 KRT9P35527 623 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 EIF2DP41214 584 aaKnown RBP13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 STAT1P42224 750 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 GALK1P51570 392 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 ZBED6P86452 979 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 ARID5AQ03989 594 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 Q6ZS52 159 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 SLC47A2Q86VL8 602 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 LONP2Q86WA8 852 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 DRC7Q8IY82 874 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 TC2NQ8N9U0 490 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 SUMF1Q8NBK3 374 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 JAKMIP2Q96AA8 810 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 HINFPQ9BQA5 517 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 CYLDQ9NQC7 956 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 NCDNQ9UBB6 729 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
SH2D3A-208ENST00000599563 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 SKILP12757 684 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CD19P15391 556 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 GNA15P30679 374 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 KIF11P52732 1056 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ZXDBP98169 803 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ASIC2Q16515 512 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 PPP1R26Q5T8A7 1209 aaPredicted RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 NUDT18Q6ZVK8 323 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 IRF2BP2Q7Z5L9 587 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ADGRG2Q8IZP9 1017 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CAMKK1Q8N5S9 505 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ANKRD52Q8NB46 1076 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 EPS8L1Q8TE68 723 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 ABHD10Q9NUJ1 306 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 LSM7Q9UK45 103 aaKnown RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 SMG5Q9UPR3 1016 aaKnown RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 SPAG17Q6Q759 2223 aa13.45□□□□□ -0.26
SH2D3A-208ENST00000599563 MYOFQ9NZM1 2061 aa13.44□□□□□ -0.26
SH2D3A-208ENST00000599563 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
SH2D3A-208ENST00000599563 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
SH2D3A-208ENST00000599563 K7ESF4 209 aa13.44□□□□□ -0.26
SH2D3A-208ENST00000599563 RNF40O75150 1001 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms