RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 AMPD1P23109 780 aa15.04■□□□□ -0
VRK3-217ENST00000599538 STIP1P31948 543 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 IFNAR2P48551 515 aa15.04■□□□□ -0
VRK3-217ENST00000599538 YWHAZP63104 245 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 SP3Q02447 781 aa15.04■□□□□ -0
VRK3-217ENST00000599538 EFTUD2Q15029 972 aaKnown RBP eCLIP15.04■□□□□ -03e-6■■□□□ 13.2
VRK3-217ENST00000599538 SLC25A52Q3SY17 297 aa15.04■□□□□ -0
VRK3-217ENST00000599538 PCGF5Q86SE9 256 aa15.04■□□□□ -0
VRK3-217ENST00000599538 SRLQ86TD4 932 aa15.04■□□□□ -0
VRK3-217ENST00000599538 IGDCC3Q8IVU1 814 aa15.04■□□□□ -0
VRK3-217ENST00000599538 MGARPQ8TDB4 240 aa15.04■□□□□ -0
VRK3-217ENST00000599538 PKNOX2Q96KN3 472 aa15.04■□□□□ -0
VRK3-217ENST00000599538 CSPG4P5Q96PW8 444 aa15.04■□□□□ -0
VRK3-217ENST00000599538 PRMT1Q99873 361 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 ULBP1Q9BZM6 244 aa15.04■□□□□ -0
VRK3-217ENST00000599538 LRRC4Q9HBW1 653 aa15.04■□□□□ -0
VRK3-217ENST00000599538 INTS9Q9NV88 658 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 LGALS13Q9UHV8 139 aa15.04■□□□□ -0
VRK3-217ENST00000599538 RRP15Q9Y3B9 282 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 THSD7BQ9C0I4 1608 aa15.04■□□□□ -0
VRK3-217ENST00000599538 A0A0U1RQF3 1178 aa15.04■□□□□ -0
VRK3-217ENST00000599538 EXOC1LA0A1B0GW35 172 aa15.04■□□□□ -0
VRK3-217ENST00000599538 TMEM120BA0PK00 339 aa15.04■□□□□ -0
VRK3-217ENST00000599538 YJEFN3A6XGL0 299 aa15.04■□□□□ -0
VRK3-217ENST00000599538 E7ENQ6 273 aa15.04■□□□□ -0
VRK3-217ENST00000599538 EBAG9O00559 213 aa15.04■□□□□ -0
VRK3-217ENST00000599538 KIF3CO14782 793 aa15.04■□□□□ -0
VRK3-217ENST00000599538 CDH16O75309 829 aa15.04■□□□□ -0
VRK3-217ENST00000599538 AVILO75366 819 aa15.04■□□□□ -0
VRK3-217ENST00000599538 AP1G2O75843 785 aa15.04■□□□□ -0
VRK3-217ENST00000599538 B3GAT3O94766 335 aa15.04■□□□□ -0
VRK3-217ENST00000599538 TGM2P21980 687 aa15.04■□□□□ -0
VRK3-217ENST00000599538 SF3A3Q12874 501 aaKnown RBP eCLIP15.04■□□□□ -0
VRK3-217ENST00000599538 TMED2Q15363 201 aa15.04■□□□□ -0
VRK3-217ENST00000599538 BBS9Q3SYG4 887 aa15.04■□□□□ -0
VRK3-217ENST00000599538 STRADAQ7RTN6 431 aa15.04■□□□□ -0
VRK3-217ENST00000599538 SRRM1Q8IYB3 904 aaKnown RBP15.04■□□□□ -0
VRK3-217ENST00000599538 HACE1Q8IYU2 909 aa15.04■□□□□ -0
VRK3-217ENST00000599538 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -0
VRK3-217ENST00000599538 ADAM32Q8TC27 787 aa15.04■□□□□ -0
VRK3-217ENST00000599538 KCTD13Q8WZ19 329 aa15.04■□□□□ -0
VRK3-217ENST00000599538 MAML1Q92585 1016 aa15.04■□□□□ -0
VRK3-217ENST00000599538 CENPTQ96BT3 561 aa15.04■□□□□ -0
VRK3-217ENST00000599538 ZNF317Q96PQ6 595 aaPredicted RBP15.04■□□□□ -0
VRK3-217ENST00000599538 STMN4Q9H169 189 aaPredicted RBP15.04■□□□□ -0
VRK3-217ENST00000599538 FZD10Q9ULW2 581 aa15.04■□□□□ -0
VRK3-217ENST00000599538 USP3Q9Y6I4 520 aa15.04■□□□□ -0
VRK3-217ENST00000599538 CASP8AP2Q9UKL3 1982 aa15.03■□□□□ -0
VRK3-217ENST00000599538 SRRM3A6NNA2 597 aaPredicted RBP15.03■□□□□ -0
VRK3-217ENST00000599538 ZNF623O75123 536 aa15.03■□□□□ -0
VRK3-217ENST00000599538 ALDH1A1P00352 501 aa15.03■□□□□ -0
VRK3-217ENST00000599538 CST5P28325 142 aaPredicted RBP15.03■□□□□ -0
VRK3-217ENST00000599538 ARL4CP56559 192 aa15.03■□□□□ -0
VRK3-217ENST00000599538 KCNJ11Q14654 390 aa15.03■□□□□ -0
VRK3-217ENST00000599538 NCBP2-AS2Q69YL0 99 aa15.03■□□□□ -0
VRK3-217ENST00000599538 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
VRK3-217ENST00000599538 FBXO36Q8NEA4 188 aa15.03■□□□□ -0
VRK3-217ENST00000599538 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
VRK3-217ENST00000599538 NT5C3BQ969T7 300 aa15.03■□□□□ -0
VRK3-217ENST00000599538 HHIPL1Q96JK4 782 aa15.03■□□□□ -0
VRK3-217ENST00000599538 TMEM209Q96SK2 561 aa15.03■□□□□ -0
VRK3-217ENST00000599538 NPY6RQ99463 290 aa15.03■□□□□ -0
VRK3-217ENST00000599538 ANLNQ9NQW6 1124 aa15.03■□□□□ -0
VRK3-217ENST00000599538 RAB6BQ9NRW1 208 aa15.03■□□□□ -0
VRK3-217ENST00000599538 ZMYND8Q9ULU4 1186 aaPredicted RBP15.03■□□□□ -0
VRK3-217ENST00000599538 TDRD15B5MCY1 1934 aaKnown RBP15.03■□□□□ -0
VRK3-217ENST00000599538 E7ESA3 106 aa15.02■□□□□ -0
VRK3-217ENST00000599538 I6L893 689 aaPredicted RBP15.02■□□□□ -0
VRK3-217ENST00000599538 M0QYT0 321 aa15.02■□□□□ -0
VRK3-217ENST00000599538 B4GALT3O60512 393 aa15.02■□□□□ -0
VRK3-217ENST00000599538 DAB1O75553 588 aa15.02■□□□□ -0
VRK3-217ENST00000599538 USP17L7P0C7H9 530 aa15.02■□□□□ -0
VRK3-217ENST00000599538 DESP17661 470 aa15.02■□□□□ -0
VRK3-217ENST00000599538 DRD4P21917 467 aa15.02■□□□□ -0
VRK3-217ENST00000599538 LHX1P48742 406 aa15.02■□□□□ -0
VRK3-217ENST00000599538 ACLYP53396 1101 aa15.02■□□□□ -0
VRK3-217ENST00000599538 SLC8A3P57103 927 aa15.02■□□□□ -0
VRK3-217ENST00000599538 NME3Q13232 169 aa15.02■□□□□ -0
VRK3-217ENST00000599538 BNIPLQ7Z465 357 aa15.02■□□□□ -0
VRK3-217ENST00000599538 SIX6OS1Q8N1H7 587 aa15.02■□□□□ -0
VRK3-217ENST00000599538 ANKRD42Q8N9B4 389 aa15.02■□□□□ -0
VRK3-217ENST00000599538 CD99L2Q8TCZ2 262 aa15.02■□□□□ -0
VRK3-217ENST00000599538 PYROXD1Q8WU10 500 aa15.02■□□□□ -0
VRK3-217ENST00000599538 TTC25Q96NG3 672 aa15.02■□□□□ -0
VRK3-217ENST00000599538 CCDC77Q9BR77 488 aa15.02■□□□□ -0
VRK3-217ENST00000599538 KIF9Q9HAQ2 790 aa15.02■□□□□ -0
VRK3-217ENST00000599538 PIGVQ9NUD9 493 aa15.02■□□□□ -0
VRK3-217ENST00000599538 TMLHEQ9NVH6 421 aa15.02■□□□□ -0
VRK3-217ENST00000599538 NOD1Q9Y239 953 aa15.02■□□□□ -0
VRK3-217ENST00000599538 TSC2P49815 1807 aa15.02■□□□□ -0
VRK3-217ENST00000599538 BCLAF3A2AJT9 711 aaKnown RBP15.02□□□□□ -0.01
VRK3-217ENST00000599538 HHLA1C9JL84 531 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 ZBED1O96006 694 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 FAM163BP0C2L3 166 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 BRAFP15056 766 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 YY1P25490 414 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 CEP128Q6ZU80 1094 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 RTN4RL1Q86UN2 441 aaPredicted RBP15.02□□□□□ -0.01
VRK3-217ENST00000599538 VSIG1Q86XK7 387 aa15.02□□□□□ -0.01
VRK3-217ENST00000599538 TMEM86AQ8N2M4 240 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms