RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 EPOPA6NHQ4 379 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 CAPN9O14815 690 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 GLUD1P00367 558 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 KRT7P08729 469 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 SPATA31D3P0C874 917 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 NCAM1P13591 858 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 SSR1P43307 286 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 ARSEP51690 589 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 ATXN1P54253 815 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 SMAD3P84022 425 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 PPP2R2DQ66LE6 453 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 SPATA31D4Q6ZUB0 917 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 CCDC149Q6ZUS6 474 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 TAC4Q86UU9 113 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 PDZD8Q8NEN9 1154 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 PSMG2Q969U7 264 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 CAPZA3Q96KX2 299 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 SMOC2Q9H3U7 446 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 WDR6Q9NNW5 1121 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 ASB3Q9Y575 518 aa15.37■□□□□ 0.05
SHKBP1-211ENST00000595945 C3orf70A6NLC5 250 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 M0QYT0 321 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 PRPSAP2O60256 369 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 F9P00740 461 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 KRT1P04264 644 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 RARAP10276 462 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 PTPN7P35236 360 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 EPHB3P54753 998 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 CKAP4Q07065 602 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 VEPH1Q14D04 833 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 TAZQ16635 292 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 BOLA3Q53S33 107 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 AADACL2Q6P093 401 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 RCOR2Q8IZ40 523 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 CMASQ8NFW8 434 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 HDAC7Q8WUI4 952 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 MS4A14Q96JA4 679 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 SLITRK1Q96PX8 696 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 CARD6Q9BX69 1037 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 ZWILCHQ9H900 591 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 CERS4Q9HA82 394 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 SLC28A3Q9HAS3 691 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 TLR8Q9NR97 1041 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 PIGVQ9NUD9 493 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 PCSK1NQ9UHG2 260 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
SHKBP1-211ENST00000595945 PGRMC1O00264 195 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 MDM4O15151 490 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 IRAK2O43187 625 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 TADA3O75528 432 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ZRANB2O95218 330 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 C8AP07357 584 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 RARGP13631 454 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 GJC1P36383 396 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 CXCR3P49682 368 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 COPS2P61201 443 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ITIH3Q06033 890 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 SEL1L2Q5TEA6 688 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 DNAJB7Q7Z6W7 309 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ITIH5Q86UX2 942 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 CEP112Q8N8E3 955 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 LRRN4CLQ8ND94 238 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ADAM32Q8TC27 787 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 ARNTL2Q8WYA1 636 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 RAPGEF5Q92565 580 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 CASP10Q92851 521 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 NTAN1Q96AB6 310 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 RBM41Q96IZ5 413 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 SNRNP25Q9BV90 132 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 LRRC3Q9BY71 257 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 IL21Q9HBE4 155 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 TMEM51Q9NW97 253 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 FZD10Q9ULW2 581 aa15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 MAGED2Q9UNF1 606 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 HELZP42694 1942 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-211ENST00000595945 PRRC2BQ5JSZ5 2229 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ZNF840PA6NDX5 716 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 PI4K2BG5E9Z4 385 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ZMYND10O75800 440 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 CSPG5O95196 566 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SLU7O95391 586 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 RALAP11233 206 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 KDELR1P24390 212 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SCAPQ12770 1279 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 PPP2R5EQ16537 467 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 CA9Q16790 459 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SMTNL2Q2TAL5 461 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 KCNT1Q5JUK3 1230 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 ERMARDQ5T6L9 678 aa15.34■□□□□ 0.05
SHKBP1-211ENST00000595945 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms