RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CPP00450 1065 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 RARBP10826 455 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 TSHRP16473 764 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 NPR3P17342 541 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 SLC18A1P54219 525 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 GBE1Q04446 702 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 SF3A3Q12874 501 aaKnown RBP eCLIP20.48■□□□□ 0.87
MBD3-209ENST00000592012 EFTUD2Q15029 972 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■■■ 28.8
MBD3-209ENST00000592012 SLC25A52Q3SY17 297 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 KIAA0319Q5VV43 1072 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 ADGRD1Q6QNK2 874 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 DEFB106AQ8N104 65 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 DENND1AQ8TEH3 1009 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 LRRN4Q8WUT4 740 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 MAGEB18Q96M61 343 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 KCTD15Q96SI1 283 aaPredicted RBP20.48■□□□□ 0.87
MBD3-209ENST00000592012 TEX264Q9Y6I9 313 aa20.48■□□□□ 0.87
MBD3-209ENST00000592012 PIAS1O75925 651 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 CHRNA1P02708 482 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 SLC10A3P09131 477 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 ELK3P41970 407 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 SLC8A3P57103 927 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 SPRED3Q2MJR0 410 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 NUGGCQ68CJ6 796 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 CSPG4P5Q96PW8 444 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 GAD1Q99259 594 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 SLC38A7Q9NVC3 462 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 CHMP2BQ9UQN3 213 aa20.47■□□□□ 0.87
MBD3-209ENST00000592012 A0A1W2PPM1 405 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 PGK1P00558 417 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 CYBAP13498 195 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 ZFXP17010 805 aaPredicted RBP20.46■□□□□ 0.87
MBD3-209ENST00000592012 MLH1P40692 756 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
MBD3-209ENST00000592012 KCTD13Q8WZ19 329 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 SENP8Q96LD8 212 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 SMC6Q96SB8 1091 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 AVILO75366 819 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 ASMTLO95671 621 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 OAS1P00973 400 aaKnown RBP20.46■□□□□ 0.87
MBD3-209ENST00000592012 NR2C2P49116 596 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 NDUFV1P49821 464 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 XRCC4Q13426 336 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 KLHL38Q2WGJ6 581 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 CLEC20AQ6ZU45 233 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 C4orf33Q8N1A6 199 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 NT5C3BQ969T7 300 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 FAM149B1Q96BN6 582 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 TGS1Q96RS0 853 aaKnown RBP20.46■□□□□ 0.87
MBD3-209ENST00000592012 PAFAH2Q99487 392 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 SENP6Q9GZR1 1112 aaPredicted RBP20.46■□□□□ 0.87
MBD3-209ENST00000592012 KDM4CQ9H3R0 1056 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 CHST12Q9NRB3 414 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 MIOSQ9NXC5 875 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 BRCA2P51587 3418 aa20.46■□□□□ 0.87
MBD3-209ENST00000592012 DNM1LO00429 736 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 CTSHP09668 335 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 MAGEA6P43360 314 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 YWHAZP63104 245 aaKnown RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 ACTN3Q08043 901 aaPredicted RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 DCAF6Q58WW2 860 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 RSPH3Q86UC2 560 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 FAM131BQ86XD5 332 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 PYROXD2Q8N2H3 581 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 AGGF1Q8N302 714 aaeCLIP20.45■□□□□ 0.86
MBD3-209ENST00000592012 CCDC110Q8TBZ0 833 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 ETNK2Q9NVF9 386 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 SMG5Q9UPR3 1016 aaKnown RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 USP3Q9Y6I4 520 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 CCT8L1PA6NM43 557 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 THP07101 528 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 ATP2A2P16615 1042 aaKnown RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 IL9RQ01113 521 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 LACTB2Q53H82 288 aaPredicted RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 SLC45A4Q5BKX6 768 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 MDH1BQ5I0G3 518 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 SERINC5Q86VE9 423 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 TRIB2Q92519 343 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 LPPQ93052 612 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 ETNK1Q9HBU6 452 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 CRTAC1Q9NQ79 661 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 DDX43Q9NXZ2 648 aaKnown RBP20.45■□□□□ 0.86
MBD3-209ENST00000592012 FZD10Q9ULW2 581 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 CAPN7Q9Y6W3 813 aa20.45■□□□□ 0.86
MBD3-209ENST00000592012 TYROBPO43914 113 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 GOT1P17174 413 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 FOXN2P32314 431 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 SULT1E1P49888 294 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 CLCNKBP51801 687 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 PITX1P78337 314 aaPredicted RBP20.44■□□□□ 0.86
MBD3-209ENST00000592012 FAXCQ5TGI0 409 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 OTUD1Q5VV17 481 aaPredicted RBP20.44■□□□□ 0.86
MBD3-209ENST00000592012 KCNT2Q6UVM3 1135 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 BNIPLQ7Z465 357 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 CDKL3Q8IVW4 592 aaPredicted RBP20.44■□□□□ 0.86
MBD3-209ENST00000592012 DCAKDQ8WVC6 231 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 FRMD8Q9BZ67 464 aaPredicted RBP20.44■□□□□ 0.86
MBD3-209ENST00000592012 KLC2Q9H0B6 622 aa20.44■□□□□ 0.86
MBD3-209ENST00000592012 FAM155AB1AL88 458 aaPredicted RBP20.44■□□□□ 0.86
MBD3-209ENST00000592012 DAB1O75553 588 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms