RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CYP2S1Q96SQ9 504 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 PACSIN1Q9BY11 444 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 RRN3Q9NYV6 651 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 RASAL2Q9UJF2 1139 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 DNMT3LQ9UJW3 386 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 TMEM59LQ9UK28 342 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 NUDT5Q9UKK9 219 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 NAALADL1Q9UQQ1 740 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 NOTCH4Q99466 2003 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
VMP1-210ENST00000589823 TCRBV5S1A1TA0A578 114 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 DPYSL4O14531 572 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 GJB6O95452 261 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 TBX18O95935 607 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 FYNP06241 537 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 PDGFRAP16234 1089 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 GBP1P32455 592 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 EFEMP1Q12805 493 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 MAMLD1Q13495 774 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 EMC1Q8N766 993 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 ACRBPQ8NEB7 543 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 JOSD2Q8TAC2 188 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 ZSCAN18Q8TBC5 510 aaPredicted RBP14.23□□□□□ -0.13
VMP1-210ENST00000589823 ARHGEF26Q96DR7 871 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 ZSWIM3Q96MP5 696 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 DDX23Q9BUQ8 820 aaKnown RBP14.23□□□□□ -0.13
VMP1-210ENST00000589823 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 MARCH2Q9P0N8 246 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 CTTNBP2NLQ9P2B4 639 aa14.23□□□□□ -0.13
VMP1-210ENST00000589823 XIRP2A4UGR9 3374 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 MDM4O15151 490 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 OLFM2O95897 454 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 LAMP2P13473 410 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 GPD1P21695 349 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
VMP1-210ENST00000589823 WEE1P30291 646 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SDC4P31431 198 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 RFC1P35251 1148 aaPredicted RBP14.22□□□□□ -0.13
VMP1-210ENST00000589823 FLT3P36888 993 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SLC7A9P82251 487 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 COG7P83436 770 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 DDX42Q86XP3 938 aaKnown RBP eCLIP14.22□□□□□ -0.13
VMP1-210ENST00000589823 MIB1Q86YT6 1006 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 ARID3BQ8IVW6 561 aaPredicted RBP14.22□□□□□ -0.13
VMP1-210ENST00000589823 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 DQX1Q8TE96 717 aaKnown RBP14.22□□□□□ -0.13
VMP1-210ENST00000589823 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
VMP1-210ENST00000589823 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SMARCD2Q92925 531 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 RPGRIP1Q96KN7 1286 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 ASB16Q96NS5 453 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SERPINB11Q96P15 392 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SLC22A12Q96S37 553 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 DESI2Q9BSY9 194 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 NUP85Q9BW27 656 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SMOC2Q9H3U7 446 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 FAM204AQ9H8W3 233 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 TDP1Q9NUW8 608 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SMPD4Q9NXE4 827 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 UVRAGQ9P2Y5 699 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 EPS15L1Q9UBC2 864 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 SFMBT1Q9UHJ3 866 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 ARHGAP26Q9UNA1 814 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 CPQQ9Y646 472 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 DOCK6Q96HP0 2047 aa14.22□□□□□ -0.13
VMP1-210ENST00000589823 OBSL1O75147 1896 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 DENND4AQ7Z401 1863 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 SLC12A8A0AV02 714 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 TMEM191CA6NGB0 347 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 C2CD4BA6NLJ0 364 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 IL9P15248 144 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 SULT1E1P49888 294 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 KPNA1P52294 538 aaPredicted RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 VAV2P52735 878 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 RPL7AP62424 266 aaKnown RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 SLC25A52Q3SY17 297 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 MTSS1LQ765P7 747 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 TAC4Q86UU9 113 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 CELF5Q8N6W0 485 aaKnown RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 TTC16Q8NEE8 873 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 ADAM32Q8TC27 787 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 CFAP57Q96MR6 1250 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 ZNF830Q96NB3 372 aaPredicted RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 KLF16Q9BXK1 252 aaPredicted RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 SMG9Q9H0W8 520 aaKnown RBP14.21□□□□□ -0.13
VMP1-210ENST00000589823 TRPV4Q9HBA0 871 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 ZFP14Q9HCL3 533 aa14.21□□□□□ -0.13
VMP1-210ENST00000589823 TMEM51Q9NW97 253 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms