RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PIWIL1Q96J94 861 aaKnown RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 FNBP1Q96RU3 617 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 ACAD9Q9H845 621 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 C10orf88Q9H8K7 445 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 SCN1AP35498 2009 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 K7ERI5 159 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 NVLO15381 856 aaKnown RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 MICAL2O94851 1124 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 HAUS5O94927 633 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 ALDH16A1Q8IZ83 802 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 ARL10Q8N8L6 244 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PCDH19Q8TAB3 1148 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 QKIQ96PU8 341 aaKnown RBP eCLIP13.92□□□□□ -0.183e-9■■■■■ 29.4
KDM4B-208ENST00000589104 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 STOML1Q9UBI4 398 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 C2CD2Q9Y426 696 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 ACKR2O00590 384 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PEX1O43933 1283 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 TGFB3P10600 412 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 KRT3P12035 628 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 MLNP12872 115 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 BGNP21810 368 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PRDX6P30041 224 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PDK2Q15119 407 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 DUOXA2Q1HG44 320 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 TEDDM1Q5T9Z0 273 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 UNC5AQ6ZN44 842 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 ALYREFQ86V81 257 aaKnown RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 PDSS2Q86YH6 399 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 SHKBP1Q8TBC3 707 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 FAM81AQ8TBF8 368 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 SCG3Q8WXD2 468 aaKnown RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 MRPL4Q9BYD3 311 aaKnown RBP13.92□□□□□ -0.18
KDM4B-208ENST00000589104 SLC7A8Q9UHI5 535 aa13.92□□□□□ -0.18
KDM4B-208ENST00000589104 hCG_2014768A0A024R1R8 64 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 CFAP69A5D8W1 941 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 RNF8O76064 485 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 IL18RAPO95256 599 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 XIAPP98170 497 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ROR2Q01974 943 aaKnown RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 SLC10A2Q12908 348 aaPredicted RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 NAB1Q13506 487 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 GPR20Q99678 358 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 HESX1Q9UBX0 185 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 FAM237BA0A1B0GVD1 139 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 SGK1O00141 431 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 LPXNO60711 386 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 RAD17O75943 681 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ALDOAP04075 364 aaKnown RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 FAM163BP0C2L3 166 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 SETSIPP0DME0 302 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 SH3PXD2AQ5TCZ1 1133 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 GBF1Q92538 1859 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 TRPM7Q96QT4 1865 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 RMI1Q9H9A7 625 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ETNK2Q9NVF9 386 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 NYNRINQ9P2P1 1898 aaKnown RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 MCM3APO60318 1980 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 APOEP02649 317 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 CNTFP26441 200 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 ARFIP2P53365 341 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 BST1Q10588 318 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 FAXCQ5TGI0 409 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 FYB2Q5VWT5 728 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
KDM4B-208ENST00000589104 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 TBCBQ99426 244 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 VPS37BQ9H9H4 285 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 PCDH18Q9HCL0 1135 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 PAK5Q9P286 719 aa13.91□□□□□ -0.18
KDM4B-208ENST00000589104 G3V3G9 751 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 TROVE2P10155 538 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■■■■□ 22.4
KDM4B-208ENST00000589104 HOXD8P13378 290 aaPredicted RBP13.9□□□□□ -0.18
KDM4B-208ENST00000589104 PTPN9P43378 593 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 ADCY1Q08828 1119 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 CCNIQ14094 377 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 PCLAFQ15004 111 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 TRMT5Q32P41 509 aaKnown RBP13.9□□□□□ -0.18
KDM4B-208ENST00000589104 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 MFSD4BQ5TF39 518 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 NPNTQ6UXI9 565 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 GSTA5Q7RTV2 222 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 RIOX2Q8IUF8 465 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 FAM71DQ8N9W8 422 aa13.9□□□□□ -0.18
KDM4B-208ENST00000589104 ZSCAN18Q8TBC5 510 aaPredicted RBP13.9□□□□□ -0.18
KDM4B-208ENST00000589104 PRPF31Q8WWY3 499 aaKnown RBP13.9□□□□□ -0.18
KDM4B-208ENST00000589104 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms