RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 STRADAQ7RTN6 431 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 TMEM150AQ86TG1 271 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 DEFB106AQ8N104 65 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 NIPA2Q8N8Q9 360 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 SHKBP1Q8TBC3 707 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 NDRG1Q92597 394 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 HLA-CQ95604 372 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 NT5C3BQ969T7 300 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 PGAP3Q96FM1 320 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 LACRTQ9GZZ8 138 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 TASP1Q9H6P5 420 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.72■□□□□ 0.437e-7■□□□□ 9.9
SCAMP4-211ENST00000588907 ZKSCAN5Q9Y2L8 839 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 ZFP37Q9Y6Q3 630 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 C2orf16Q68DN1 1984 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 RCCD1A6NED2 376 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 RNF8O76064 485 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 OLFM2O95897 454 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 PSMA2P25787 234 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 MSNP26038 577 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 WEE1P30291 646 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 SLC1A1P43005 524 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 NAP1L1P55209 391 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 DLX2Q07687 328 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 TAF5Q15542 800 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 PUS10Q3MIT2 529 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 SND1Q7KZF4 910 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 PHLDB2Q86SQ0 1253 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 JOSD2Q8TAC2 188 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 EDEM1Q92611 657 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 NPY6RQ99463 290 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 FAM204AQ9H8W3 233 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 OSER1Q9NX31 292 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 GDE1Q9NZC3 331 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 PYCARDQ9ULZ3 195 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 NAALADL1Q9UQQ1 740 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 FAM50BQ9Y247 325 aa17.71■□□□□ 0.43
SCAMP4-211ENST00000588907 ANAPC1Q9H1A4 1944 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 FYNP06241 537 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC2A3P11169 496 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 AVPR1AP37288 418 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 SULT1E1P49888 294 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 COG7P83436 770 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 CCDC85BQ15834 202 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC5A9Q2M3M2 681 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 C11orf63Q6NUN7 778 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 DDX42Q86XP3 938 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 EMC1Q8N766 993 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 KIAA1524Q8TCG1 905 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 DQX1Q8TE96 717 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 SLITRK6Q9H5Y7 841 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 TRPC7Q9HCX4 862 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 OSGEPQ9NPF4 335 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 MARCH2Q9P0N8 246 aa17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 HBS1LQ9Y450 684 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-211ENST00000588907 MACROD2A1Z1Q3 448 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 COCHO43405 550 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 PROSCO94903 275 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 TRUB2O95900 331 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 IGLV3-25P01717 112 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 HDCP19113 662 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 KCNA5P22460 613 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 RDXP35241 583 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CCR2P41597 374 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 AIF1P55008 147 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 SLC7A9P82251 487 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CYP4F8P98187 520 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 TEAD2Q15562 447 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CCDC14Q49A88 953 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 GPR158Q5T848 1215 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 ACBD5Q5T8D3 534 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 SYPL2Q5VXT5 272 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 KIAA1958Q8N8K9 716 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 TRIM58Q8NG06 486 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 SUSD6Q92537 303 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CFAP57Q96MR6 1250 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 CCSER2Q9H7U1 834 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 KIF9Q9HAQ2 790 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 GUCA1BQ9UMX6 200 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 NOTCH4Q99466 2003 aa17.69■□□□□ 0.42
SCAMP4-211ENST00000588907 M0QYT0 321 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 IRAK2O43187 625 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 MOSPD3O75425 235 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 ENDOD1O94919 500 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 GJB6O95452 261 aa17.68■□□□□ 0.42
SCAMP4-211ENST00000588907 CKMP06732 381 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms