RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CDC25CP30307 473 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 SLC1A1P43005 524 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 SSR1P43307 286 aaKnown RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 KCNC3Q14003 757 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 ACAP1Q15027 740 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 SLC25A52Q3SY17 297 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 PDZD4Q76G19 769 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 ZNF334Q9HCZ1 680 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 OLA1Q9NTK5 396 aaKnown RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 PACSIN2Q9UNF0 486 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 ZNF840PA6NDX5 716 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 DPYSL4O14531 572 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 ENC1O14682 589 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 NCK2O43639 380 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 TADA3O75528 432 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 POU2F2P09086 479 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 ZDHHC11BP0C7U3 371 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 POU3F3P20264 500 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 COMTP21964 271 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 PTPN9P43378 593 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 EP400NLQ6ZTU2 488 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 PEX26Q7Z412 305 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 NT5DC3Q86UY8 548 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 HS6ST3Q8IZP7 471 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 SMG7Q92540 1137 aaKnown RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 MRPS31Q92665 395 aaKnown RBP23.62■■□□□ 1.37
ACTN4-210ENST00000588618 FAM204AQ9H8W3 233 aa23.62■■□□□ 1.37
ACTN4-210ENST00000588618 TLR5O60602 858 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 TNNT1P13805 278 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 MAN1A1P33908 653 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 ADGRE1Q14246 886 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 HECTD3Q5T447 861 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 TMC5Q6UXY8 1006 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 TMEM184AQ6ZMB5 413 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 C12orf76Q8N812 135 aaPredicted RBP23.61■■□□□ 1.37
ACTN4-210ENST00000588618 NIPA2Q8N8Q9 360 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 FAM172AQ8WUF8 416 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 NT5C3BQ969T7 300 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 NCAPGQ9BPX3 1015 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 ATXN3LQ9H3M9 355 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.61■■□□□ 1.37
ACTN4-210ENST00000588618 DNAI1Q9UI46 699 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 AMFRQ9UKV5 643 aa23.61■■□□□ 1.37
ACTN4-210ENST00000588618 SYNJ2BP-COX16A0A087WUM0 186 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 M0QYT0 321 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 GBP1P32455 592 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 C10orf120Q5SQS8 335 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 SNX30Q5VWJ9 437 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 SND1Q7KZF4 910 aaKnown RBP eCLIP23.6■■□□□ 1.37
ACTN4-210ENST00000588618 TMEM150AQ86TG1 271 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 CMASQ8NFW8 434 aaPredicted RBP23.6■■□□□ 1.37
ACTN4-210ENST00000588618 CD101Q93033 1021 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 TBCBQ99426 244 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 NPY6RQ99463 290 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 LRRC3Q9BY71 257 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 IL21Q9HBE4 155 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 HCFC1R1Q9NWW0 138 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 COX16Q9P0S2 106 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 NUDT5Q9UKK9 219 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 C2orf16Q68DN1 1984 aa23.6■■□□□ 1.37
ACTN4-210ENST00000588618 KIF2AO00139 706 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 NRG2O14511 850 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 LINC01565O15544 149 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 LRCH4O75427 683 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 F11P03951 625 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 ATP1A1P05023 1023 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 RHOP08100 348 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 ATXN1P54253 815 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TAS2R40P59535 323 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 NME3Q13232 169 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 RARS2Q5T160 578 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 MEI1Q5TIA1 1274 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 GPR153Q6NV75 609 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 BNIPLQ7Z465 357 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TMC8Q8IU68 726 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TLR10Q9BXR5 811 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 DDIT4Q9NX09 232 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 CLDND1Q9NY35 253 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 DNMT3BQ9UBC3 853 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 GLP2RO95838 553 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TRUB2O95900 331 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 F9P00740 461 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TUBB4AP04350 444 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 HOXB8P17481 243 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 MARCKSL1P49006 195 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TUBP50607 506 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 DEUP1Q05D60 604 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 HADHQ16836 314 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 ANKRD54Q6NXT1 300 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 CC2D1AQ6P1N0 951 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 STRADAQ7RTN6 431 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 GRASPQ7Z6J2 395 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 ADAM32Q8TC27 787 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 DQX1Q8TE96 717 aaKnown RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 CENPIQ92674 756 aaPredicted RBP23.59■■□□□ 1.37
ACTN4-210ENST00000588618 SERPINB11Q96P15 392 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 CCSER2Q9H7U1 834 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 TRPC7Q9HCX4 862 aa23.59■■□□□ 1.37
ACTN4-210ENST00000588618 PRUNE2Q8WUY3 3088 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 A0A1W2PRU2 124 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms