RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FUT11Q495W5 492 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 METTL3Q86U44 580 aaKnown RBP16.15■□□□□ 0.18
IFT20-216ENST00000588477 MARCH9Q86YJ5 346 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 BHMTQ93088 406 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 SMARCD1Q96GM5 515 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 ITM2CQ9NQX7 267 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 TOR4AQ9NXH8 423 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 PLK2Q9NYY3 685 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 MARK1Q9P0L2 795 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 LSM7Q9UK45 103 aaKnown RBP16.15■□□□□ 0.18
IFT20-216ENST00000588477 STON1Q9Y6Q2 735 aa16.15■□□□□ 0.18
IFT20-216ENST00000588477 SETXQ7Z333 2677 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 MYLKQ15746 1914 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 A0A087X0B3 334 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 GOLGA8CPA6NN73 597 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 CLIC2O15247 247 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 CILPO75339 1184 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 AP1G2O75843 785 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 BEST1O76090 585 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 CER1O95813 267 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 ZNF883P0CG24 379 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 CYP4F3Q08477 520 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 PSMD6Q15008 389 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 BAHD1Q8TBE0 780 aaPredicted RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 RHBDD1Q8TEB9 315 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 MKRN2Q9H000 416 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.17
IFT20-216ENST00000588477 TLR8Q9NR97 1041 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 KRT82Q9NSB4 513 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 USP36Q9P275 1121 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 DKK4Q9UBT3 224 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 FNDC3AQ9Y2H6 1198 aaKnown RBP16.14■□□□□ 0.17
IFT20-216ENST00000588477 NFE2L3Q9Y4A8 694 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 KNL1Q8NG31 2342 aa16.14■□□□□ 0.17
IFT20-216ENST00000588477 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 TRABD2BA6NFA1 517 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 BCAT2O15382 392 aaPredicted RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 CLSTN1O94985 981 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 STAU1O95793 577 aaKnown RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 ATICP31939 592 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 ATP5C1P36542 298 aaKnown RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 BNC1Q01954 994 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 CYP24A1Q07973 514 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 GOLGA8FQ08AF8 430 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 GOLGA8DPQ0D2H9 430 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 STARD3Q14849 445 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 HLA-BQ31612 363 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 PDILTQ8N807 584 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 ZMIZ2Q8NF64 920 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 TNIP3Q96KP6 325 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 SMOQ99835 787 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 XYLT2Q9H1B5 865 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 FBXO44Q9H4M3 255 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 EIF2B4Q9UI10 523 aaKnown RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.13■□□□□ 0.17
IFT20-216ENST00000588477 ASXL3Q9C0F0 2248 aa16.13■□□□□ 0.17
IFT20-216ENST00000588477 METTL12A8MUP2 240 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 TGFB1I1O43294 461 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 PHACTR2O75167 634 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 CCDC130P13994 396 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 TPMTP51580 245 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 CYP2J2P51589 502 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 MAP3K7CLP57077 242 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 IL27RAQ6UWB1 636 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 DBX2Q6ZNG2 339 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 ACOT1Q86TX2 421 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 ZNF507Q8TCN5 953 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 COL26A1Q96A83 441 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 CRELD1Q96HD1 420 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 AGPAT3Q9NRZ7 376 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 FBXO10Q9UK96 956 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 NUDT5Q9UKK9 219 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 PLXNA2O75051 1894 aa16.12■□□□□ 0.17
IFT20-216ENST00000588477 MDM4O15151 490 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 EIF3DO15371 548 aaKnown RBP eCLIP16.11■□□□□ 0.17
IFT20-216ENST00000588477 FLRT2O43155 660 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 DKK1O94907 266 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 OXTRP30559 389 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 IL12RB1P42701 662 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 ZNF667Q5HYK9 610 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 FAM173BQ6P4H8 233 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 TMPRSS6Q8IU80 811 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 GALNT15Q8N3T1 639 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 XXYLT1Q8NBI6 393 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 SIPA1Q96FS4 1042 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 P2RY11Q96G91 374 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 CDC6Q99741 560 aa16.11■□□□□ 0.17
IFT20-216ENST00000588477 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
IFT20-216ENST00000588477 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms