RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 ZBED6P86452 979 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 KLHL30Q0D2K2 578 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 VSTM4Q8IW00 320 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 MSANTD4Q8NCY6 345 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 DNASE1L2Q92874 299 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 C18orf8Q96DM3 657 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 IQCDQ96DY2 449 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 FAM83CQ9BQN1 747 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 ARHGEF3Q9NR81 526 aa22.44■■□□□ 1.18
RETREG3-202ENST00000585726 KRBA1A5PL33 1030 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 ARNTLO00327 626 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 STK25O00506 426 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 PDGFBP01127 241 aaPredicted RBP22.43■■□□□ 1.18
RETREG3-202ENST00000585726 KPNA1P52294 538 aaPredicted RBP22.43■■□□□ 1.18
RETREG3-202ENST00000585726 YWHAZP63104 245 aaKnown RBP22.43■■□□□ 1.18
RETREG3-202ENST00000585726 SLC6A3Q01959 620 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 PDGFRLQ15198 375 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 CLEC16AQ2KHT3 1053 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 MMS22LQ6ZRQ5 1243 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 PHLDB2Q86SQ0 1253 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 MFSD1Q9H3U5 465 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 HPS4Q9NQG7 708 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 TTC28Q96AY4 2481 aa22.43■■□□□ 1.18
RETREG3-202ENST00000585726 E2F8A0AVK6 867 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 GOLGA8SH3BPF8 625 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 MSI1O43347 362 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 FYNP06241 537 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 UNGP13051 313 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 NSFP46459 744 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 SOX9P48436 509 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 RNASE9P60153 205 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 COG7P83436 770 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 RUNX3Q13761 415 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 MLF2Q15773 248 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 TDRD12Q587J7 1177 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 EFHC1Q5JVL4 640 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 OLFML1Q6UWY5 402 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 TPRG1Q6ZUI0 275 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 TOGARAM2Q6ZUX3 1019 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 TMC6Q7Z403 805 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 C11orf70Q9BRQ4 267 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 NUCKS1Q9H1E3 243 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 POPDC2Q9HBU9 364 aa22.42■■□□□ 1.18
RETREG3-202ENST00000585726 LSM7Q9UK45 103 aaKnown RBP22.42■■□□□ 1.18
RETREG3-202ENST00000585726 HELZP42694 1942 aaKnown RBP22.41■■□□□ 1.18
RETREG3-202ENST00000585726 STC2O76061 302 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 GABRB2P47870 512 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 EML3Q32P44 896 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 ITPRIPL2Q3MIP1 535 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 SYPL2Q5VXT5 272 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 ZNF571Q7Z3V5 609 aaPredicted RBP22.41■■□□□ 1.18
RETREG3-202ENST00000585726 XYLT1Q86Y38 959 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 BBS7Q8IWZ6 715 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 FLCNQ8NFG4 579 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 ADAM32Q8TC27 787 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 PBXIP1Q96AQ6 731 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 TRIM62Q9BVG3 475 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 C11orf16Q9NQ32 467 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 TRPV5Q9NQA5 729 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 PIAS3Q9Y6X2 628 aa22.41■■□□□ 1.18
RETREG3-202ENST00000585726 TMCO5BA8MYB1 307 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 SLC9A3R1O14745 358 aaPredicted RBP22.4■■□□□ 1.18
RETREG3-202ENST00000585726 HSF2BPO75031 334 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 TPM1P09493 284 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 CD72P21854 359 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 PRKCIP41743 596 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 TRIM14Q14142 442 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 DCAF6Q58WW2 860 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 FAM102AQ5T9C2 384 aaPredicted RBP22.4■■□□□ 1.18
RETREG3-202ENST00000585726 MSANTD2Q6P1R3 559 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 ZDHHC17Q8IUH5 632 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 DEFB106AQ8N104 65 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 CPA6Q8N4T0 437 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 DQX1Q8TE96 717 aaKnown RBP22.4■■□□□ 1.18
RETREG3-202ENST00000585726 ATP2A3Q93084 1043 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 C1QTNF1Q9BXJ1 281 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 ADAM22Q9P0K1 906 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 TBC1D14Q9P2M4 693 aa22.4■■□□□ 1.18
RETREG3-202ENST00000585726 BDP1A6H8Y1 2624 aa22.39■■□□□ 1.18
RETREG3-202ENST00000585726 MUC3AQ02505 3323 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 OTOL1A6NHN0 477 aaPredicted RBP22.39■■□□□ 1.17
RETREG3-202ENST00000585726 GLI1P08151 1106 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 MMP8P22894 467 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 ZNF75DP51815 510 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 CENPCQ03188 943 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 TMEM31Q5JXX7 168 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 HTR3DQ70Z44 454 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 SYN2Q92777 582 aaPredicted RBP22.39■■□□□ 1.17
RETREG3-202ENST00000585726 SHDQ96IW2 340 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 SYT11Q9BT88 431 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.39■■□□□ 1.17
RETREG3-202ENST00000585726 ECT2Q9H8V3 914 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 TBC1D17Q9HA65 648 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 ASNSD1Q9NWL6 643 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 TAS2R14Q9NYV8 317 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 COL4A3Q01955 1670 aa22.39■■□□□ 1.17
RETREG3-202ENST00000585726 TICRRQ7Z2Z1 1910 aa22.38■■□□□ 1.17
RETREG3-202ENST00000585726 SYNJ2BP-COX16A0A087WUM0 186 aa22.38■■□□□ 1.17
RETREG3-202ENST00000585726 GREM1O60565 184 aa22.38■■□□□ 1.17
RETREG3-202ENST00000585726 NFATC1O95644 943 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms