RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ARID3AQ99856 593 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 DUSP9Q99956 384 aaKnown RBP21.51■■□□□ 1.03
TOP3A-219ENST00000584887 CISHQ9NSE2 258 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.51■■□□□ 1.03
TOP3A-219ENST00000584887 RAB20Q9NX57 234 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 NUP205Q92621 2012 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 GREM1O60565 184 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 TYRP14679 529 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 PRCPP42785 496 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 PLA2G4AP47712 749 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 LPCAT2Q7L5N7 544 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 SCD5Q86SK9 330 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 TADA2BQ86TJ2 420 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 OLIG1Q8TAK6 271 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 WDR35Q9P2L0 1181 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 RASAL2Q9UJF2 1139 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 CACNA1BQ00975 2339 aa21.5■■□□□ 1.03
TOP3A-219ENST00000584887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 KHNYNO15037 678 aaKnown RBP21.49■■□□□ 1.03
TOP3A-219ENST00000584887 HMBSP08397 361 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 HOXB2P14652 356 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 P2RY2P41231 377 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 EGFLAMQ63HQ2 1017 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 KLHDC10Q6PID8 442 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 CCDC186Q7Z3E2 898 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 TMEFF1Q8IYR6 380 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 FMR1NBQ8N0W7 255 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-219ENST00000584887 TTC39CQ8N584 583 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 FRMD1Q8N878 549 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 ERCC4Q92889 916 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-219ENST00000584887 TATDN2Q93075 761 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 TMEM176AQ96HP8 235 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 PLK2Q9NYY3 685 aa21.49■■□□□ 1.03
TOP3A-219ENST00000584887 PATE3B3GLJ2 98 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 CACNG3O60359 315 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 SMC2O95347 1197 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 PSEN1P49768 467 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 RAD23BP54727 409 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 EFEMP1Q12805 493 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 RSRC2Q7L4I2 434 aaKnown RBP21.48■■□□□ 1.03
TOP3A-219ENST00000584887 CHPFQ8IZ52 775 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 SLC4A11Q8NBS3 891 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 EPG5Q9HCE0 2579 aa21.48■■□□□ 1.03
TOP3A-219ENST00000584887 LNP1A1A4G5 178 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 C4orf47A7E2U8 309 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 ZBTB24O43167 697 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-219ENST00000584887 STC2O76061 302 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 NTSR1P30989 418 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 SLC8A3P57103 927 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 BYSLQ13895 437 aaKnown RBP21.47■■□□□ 1.03
TOP3A-219ENST00000584887 CBWD6Q4V339 395 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 CBWD3Q5JTY5 395 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 CBWD5Q5RIA9 395 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 ZNF658Q5TYW1 1059 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-219ENST00000584887 SDE2Q6IQ49 451 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 TOGARAM2Q6ZUX3 1019 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 KCNV2Q8TDN2 545 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 SMARCE1Q969G3 411 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 ACOX2Q99424 681 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 MARK1Q9P0L2 795 aa21.47■■□□□ 1.03
TOP3A-219ENST00000584887 MBD1Q9UIS9 605 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-219ENST00000584887 TM4SF5O14894 197 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 SLC16A3O15427 465 aaKnown RBP21.46■■□□□ 1.03
TOP3A-219ENST00000584887 DGKGP49619 791 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 BECN1Q14457 450 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 GOLGA7BQ2TAP0 167 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 MAP7D1Q3KQU3 841 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 N4BP2L1Q5TBK1 243 aaPredicted RBP21.46■■□□□ 1.03
TOP3A-219ENST00000584887 ANKRD40Q6AI12 368 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 Q6ZNB5 142 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 PIGZQ86VD9 579 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 GSDMAQ96QA5 445 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 CDK5RAP1Q96SZ6 601 aaKnown RBP21.46■■□□□ 1.03
TOP3A-219ENST00000584887 LSM14BQ9BX40 385 aaKnown RBP21.46■■□□□ 1.03
TOP3A-219ENST00000584887 CLIC5Q9NZA1 410 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 HCN2Q9UL51 889 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
TOP3A-219ENST00000584887 ATXN2Q99700 1313 aaKnown RBP21.46■■□□□ 1.03
TOP3A-219ENST00000584887 TRIM49BA6NDI0 452 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 CD19P15391 556 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 GABRG2P18507 467 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 CORO1AP31146 461 aaKnown RBP21.45■■□□□ 1.02
TOP3A-219ENST00000584887 PTGER3P43115 390 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 PMS1P54277 932 aaKnown RBP21.45■■□□□ 1.02
TOP3A-219ENST00000584887 FKBP3Q00688 224 aaKnown RBP21.45■■□□□ 1.02
TOP3A-219ENST00000584887 LRMPQ12912 555 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 ARHGAP17Q68EM7 881 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 ARHGAP18Q8N392 663 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 DEFB119Q8N690 84 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 FAXDC2Q96IV6 333 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 MARCH2Q9P0N8 246 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 CALCOCO1Q9P1Z2 691 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 ARMCX3Q9UH62 379 aaPredicted RBP21.45■■□□□ 1.02
TOP3A-219ENST00000584887 STRIP2Q9ULQ0 834 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 CHD8Q9HCK8 2581 aa21.45■■□□□ 1.02
TOP3A-219ENST00000584887 PRRT4C9JH25 899 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 KLKB1P03952 638 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 NOVA1P51513 510 aaKnown RBP21.44■■□□□ 1.02
TOP3A-219ENST00000584887 TKTL1P51854 596 aa21.44■■□□□ 1.02
TOP3A-219ENST00000584887 YWHAGP61981 247 aaKnown RBP eCLIP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms