RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 KRBA2Q6ZNG9 492 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HTR3DQ70Z44 454 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEM25Q86YD3 366 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SYT12Q8IV01 421 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEFF1Q8IYR6 380 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GUF1Q8N442 669 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TTC39CQ8N584 583 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CDK5RAP1Q96SZ6 601 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HNRNPABQ99729 332 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MARK1Q9P0L2 795 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CALCOCO1Q9P1Z2 691 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 WDR35Q9P2L0 1181 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CEP192Q8TEP8 1941 aa9.17□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CEP250Q9BV73 2442 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HHLA1C9JL84 531 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MDM4O15151 490 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 STX10O60499 249 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZNF217O75362 1048 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TBX18O95935 607 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CFIP05156 583 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GABRG2P18507 467 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HOXD12P35452 270 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PTGER3P43115 390 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FOXC1Q12948 553 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ADAM9Q13443 819 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 STARD3Q14849 445 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SPDYCQ5MJ68 293 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 C1orf220Q5T0J3 134 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SH3PXD2AQ5TCZ1 1133 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TCERG1LQ5VWI1 586 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KLHDC10Q6PID8 442 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RSRC2Q7L4I2 434 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CCDC186Q7Z3E2 898 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RABEPKQ7Z6M1 372 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MIB1Q86YT6 1006 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 BHMTQ93088 406 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 WBP2Q969T9 261 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NMUR1Q9HB89 426 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 APOBEC3GQ9HC16 384 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 OSER1Q9NX31 292 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CLIC5Q9NZA1 410 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NUDT5Q9UKK9 219 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 STARD13Q9Y3M8 1113 aa9.16□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 A0A1W2PQ27 194 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 A0A1W2PQ64 194 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 A0A1W2PQD8 194 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TRIM24O15164 1050 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CETN3O15182 167 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 STC2O76061 302 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CYBBP04839 570 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ENGP17813 658 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CSRP1P21291 193 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GTF2H1P32780 548 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CHKAP35790 457 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PGFP49763 221 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KIF11P52732 1056 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 IRX4P78413 519 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 COG7P83436 770 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SHC2P98077 582 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 EDRF1Q3B7T1 1238 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MAP7D1Q3KQU3 841 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PEAR1Q5VY43 1037 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KIAA1324Q6UXG2 1013 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TOGARAM2Q6ZUX3 1019 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ARHGAP18Q8N392 663 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HDDC3Q8N4P3 179 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FRMD1Q8N878 549 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FBXL13Q8NEE6 735 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CEP76Q8TAP6 659 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 IPO4Q8TEX9 1081 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEM176AQ96HP8 235 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FAXDC2Q96IV6 333 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HEXIM2Q96MH2 286 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TSG101Q99816 390 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GTPBP2Q9BX10 602 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DUSP16Q9BY84 665 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CISHQ9NSE2 258 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RAB20Q9NX57 234 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PLK2Q9NYY3 685 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MBD1Q9UIS9 605 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CYP8B1Q9UNU6 501 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZNF510Q9Y2H8 683 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MYOFQ9NZM1 2061 aa9.15□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZFHX4Q86UP3 3567 aa9.14□□□□□ -0.95
CDK5RAP3-229ENST00000583697 IGHV1OR15-9A0A0B4J2B8 117 aa9.14□□□□□ -0.95
CDK5RAP3-229ENST00000583697 GFRA2O00451 464 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms