RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
SS18-221ENST00000582448 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 GPR62Q9BZJ7 368 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 TTYH3Q9C0H2 523 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 RXFP1Q9HBX9 757 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 IPPQ9Y573 584 aa10.92□□□□□ -0.66
SS18-221ENST00000582448 C2orf16Q68DN1 1984 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 TADA2AO75478 443 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 USP17L7P0C7H9 530 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 CD72P21854 359 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 AKAP5P24588 427 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 POLR2FP61218 127 aaKnown RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 ID3Q02535 119 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 ENPEPQ07075 957 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 NCBP1Q09161 790 aaKnown RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 HTR4Q13639 388 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 MAP7Q14244 749 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 MAPK6Q16659 721 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 USP41Q3LFD5 358 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 FUT10Q6P4F1 479 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 PARM1Q6UWI2 310 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 SUMF1Q8NBK3 374 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 ATRIPQ8WXE1 791 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 TCHPQ9BT92 498 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 OSBPL1AQ9BXW6 950 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 TRIM6Q9C030 488 aaPredicted RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 C1GALT1Q9NS00 363 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 CACNG4Q9UBN1 327 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 PARP2Q9UGN5 583 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
SS18-221ENST00000582448 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
SS18-221ENST00000582448 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 INO80B-WBP1J3KQ70 363 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 EXTL3O43909 919 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 PIGRP01833 764 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 GTF2H1P32780 548 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 GRIK1P39086 918 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 STARD6P59095 220 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 RAPGEF1Q13905 1077 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 CAPSQ13938 189 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 MEA1Q16626 185 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 PDXDC1Q6P996 788 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 KIF18AQ8NI77 898 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 GPBAR1Q8TDU6 330 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 HASPINQ8TF76 798 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 FGF14Q92915 247 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 IKZF4Q9H2S9 585 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 NLRC4Q9NPP4 1024 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 SLC2A4RGQ9NR83 387 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 CHST7Q9NS84 486 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 CACNA2D2Q9NY47 1150 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 FBXL5Q9UKA1 691 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 PPM1HQ9ULR3 514 aa10.9□□□□□ -0.66
SS18-221ENST00000582448 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 EP300Q09472 2414 aaPredicted RBP10.9□□□□□ -0.66
SS18-221ENST00000582448 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 GOLGA8IPA6NC78 632 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 GOLGA8JA6NMD2 632 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 CCL16O15467 120 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 CLDN3O15551 220 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 AKR1B10O60218 316 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 KIF5CO60282 957 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 TSPAN1O60635 241 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 NDUFA10O95299 355 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 SERPING1P05155 500 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 PRKCBP05771 671 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 TRIM49P0CI25 452 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 TRIM49CP0CI26 452 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 PON1P27169 355 aa10.89□□□□□ -0.67
SS18-221ENST00000582448 MXI1P50539 228 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms