RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 TERB1Q8NA31 727 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 FCRL3Q96P31 734 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 REEP2Q9BRK0 252 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 GPR174Q9BXC1 333 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 CUEDC2Q9H467 287 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 PRORYQ9H606 182 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 MAGEF1Q9HAY2 307 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 PARVGQ9HBI0 331 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 R3HCC1Q9Y3T6 440 aaKnown RBP11.4□□□□□ -0.58
TOP3A-210ENST00000580713 RAD54BQ9Y620 910 aa11.4□□□□□ -0.58
TOP3A-210ENST00000580713 E2F8A0AVK6 867 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 SYCE3A1L190 88 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 PLK4O00444 970 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 BCAT2O15382 392 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 RRP8O43159 456 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 HOXC11O43248 304 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 KRT18P05783 430 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 NCAM1P13591 858 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 SEMG2Q02383 582 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 TAF10Q12962 218 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 LSM14AQ8ND56 463 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 BAHD1Q8TBE0 780 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 CACTINQ8WUQ7 758 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 DNASE2BQ8WZ79 361 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 POMGNT1Q8WZA1 660 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 TOE1Q96GM8 510 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 MRGPRX1Q96LB2 322 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 SLITRK1Q96PX8 696 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 DNAJC17Q9NVM6 304 aaKnown RBP11.39□□□□□ -0.59
TOP3A-210ENST00000580713 HCN2Q9UL51 889 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 BTBD3Q9Y2F9 522 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 KNTC1P50748 2209 aa11.39□□□□□ -0.59
TOP3A-210ENST00000580713 A0A1B0GVT2 93 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 E9PAM4 449 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 TRIM66O15016 1216 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 GPR37O15354 613 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 TNFSF14O43557 240 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 DKK1O94907 266 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 OLFM2O95897 454 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 OAS1P00973 400 aaKnown RBP11.38□□□□□ -0.59
TOP3A-210ENST00000580713 PDGFRBP09619 1106 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 IRF1P10914 325 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
TOP3A-210ENST00000580713 AFMP43652 599 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 CFHR1Q03591 330 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 PNOCQ13519 176 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 POSTNQ15063 836 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 MAPRE1Q15691 268 aaKnown RBP11.38□□□□□ -0.59
TOP3A-210ENST00000580713 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 FAM171BQ6P995 826 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-210ENST00000580713 TMEM25Q86YD3 366 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 LRRC52Q8N7C0 313 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 C1orf127Q8N9H9 656 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 LARP4BQ92615 738 aaKnown RBP11.38□□□□□ -0.59
TOP3A-210ENST00000580713 RAD54LQ92698 747 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 KCNN1Q92952 543 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 NXPE2Q96DL1 559 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 PAGE5Q96GU1 130 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 CEP295NLQ96MC4 621 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 TTLL2Q9BWV7 592 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 SPHK2Q9NRA0 654 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 GDAP2Q9NXN4 497 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 CDH9Q9ULB4 789 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 STARD13Q9Y3M8 1113 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 PCDHGB2Q9Y5G2 931 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 AK5Q9Y6K8 562 aa11.38□□□□□ -0.59
TOP3A-210ENST00000580713 KNL1Q8NG31 2342 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 TENM4Q6N022 2769 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 F8VP50 259 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 GABRDO14764 452 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 TBCAO75347 108 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 JUPP14923 745 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 LMO2P25791 158 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 ABCD1P33897 745 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 ZNF445P59923 1031 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 RBP5P82980 135 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 GTF2BQ00403 316 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 BNC1Q01954 994 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 SMAD1Q15797 465 aaKnown RBP11.37□□□□□ -0.59
TOP3A-210ENST00000580713 SOWAHAQ2M3V2 549 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
TOP3A-210ENST00000580713 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms