RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TMEM92Q6UXU6 159 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 SCD5Q86SK9 330 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 TMEM25Q86YD3 366 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 MDGA1Q8NFP4 955 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 SLC35C1Q96A29 364 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 HEXIM2Q96MH2 286 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 ARMCX3Q9UH62 379 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 EVLQ9UI08 416 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
SMARCE1-216ENST00000580419 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 CEP295Q9C0D2 2601 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 CEP192Q8TEP8 1941 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 TBC1D3BA6NDS4 549 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 SGK1O00141 431 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 CYP26A1O43174 497 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ADAM23O75077 832 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 PENKP01210 267 aaPredicted RBP15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 C7P10643 843 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 HNRNPLP14866 589 aaKnown RBP eCLIP15.24■□□□□ 0.033e-11■■□□□ 13.3
SMARCE1-216ENST00000580419 NTSR1P30989 418 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 HOXC13P31276 330 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 PGFP49763 221 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ZNF445P59923 1031 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 MESP2Q0VG99 397 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ORC1Q13415 861 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 CUL2Q13617 745 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 FAM217AQ8IXS0 508 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 CPXM2Q8N436 756 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 TXNDC5Q8NBS9 432 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 SPACA7Q96KW9 195 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 NMUR1Q9HB89 426 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 GDPD2Q9HCC8 539 aa15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 OLA1Q9NTK5 396 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-216ENST00000580419 A0A1W2PQH9 124 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 XPO1O14980 1071 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 STC2O76061 302 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 KLF8O95600 359 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CAVIN2O95810 425 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 LATS1O95835 1130 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 TBX18O95935 607 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 PAEPP09466 180 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 TYRP14679 529 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CD58P19256 250 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 BCAT1P54687 386 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 PDE4CQ08493 712 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 STILQ15468 1287 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 AASDHQ4L235 1098 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 C10orf120Q5SQS8 335 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 PEAR1Q5VY43 1037 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 GRAMD4Q6IC98 578 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 ANO7Q6IWH7 933 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 METTL3Q86U44 580 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 PIGZQ86VD9 579 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 SMYD4Q8IYR2 804 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 UBR7Q8N806 425 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 ZNF513Q8N8E2 541 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 KCTD13Q8WZ19 329 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 JAKMIP2Q96AA8 810 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 GABRG3Q99928 467 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 BBS2Q9BXC9 721 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 SLC2A11Q9BYW1 496 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 CD248Q9HCU0 757 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 NAGPAQ9UK23 515 aa15.23■□□□□ 0.03
SMARCE1-216ENST00000580419 ZNF217O75362 1048 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 CISD3P0C7P0 127 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 VDRP11473 427 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 TIE1P35590 1138 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 SEC13P55735 322 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 ENPP2Q13822 863 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 MEA1Q16626 185 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 ANO4Q32M45 955 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 PKDCCQ504Y2 493 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 STPG1Q5TH74 334 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 SLC36A4Q6YBV0 504 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 RABEPKQ7Z6M1 372 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 CCDC33Q8N5R6 958 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 WBP2Q969T9 261 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 PLD4Q96BZ4 506 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 LSM14BQ9BX40 385 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 POLR3BQ9NW08 1133 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 STRIP2Q9ULQ0 834 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 CKAP5Q14008 2032 aa15.22■□□□□ 0.03
SMARCE1-216ENST00000580419 MAP1BP46821 2468 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 BICDL2A1A5D9 508 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 DCDC2BA2VCK2 349 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 GDF9O60383 454 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 GNA14O95837 355 aa15.21■□□□□ 0.03
SMARCE1-216ENST00000580419 ZBED1O96006 694 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms