RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
IFT20-208ENST00000578985 DUS2Q9NX74 493 aaKnown RBP16.1■□□□□ 0.17
IFT20-208ENST00000578985 CA14Q9ULX7 337 aa16.1■□□□□ 0.17
IFT20-208ENST00000578985 SH3BP1Q9Y3L3 701 aa16.1■□□□□ 0.17
IFT20-208ENST00000578985 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
IFT20-208ENST00000578985 MYOFQ9NZM1 2061 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 BDP1A6H8Y1 2624 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 COL4A2P08572 1712 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 SLC12A8A0AV02 714 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 E2F8A0AVK6 867 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 TMEM221A6NGB7 291 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 M0R296 226 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 ARNTLO00327 626 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 SLC9A3R1O14745 358 aaPredicted RBP16.09■□□□□ 0.17
IFT20-208ENST00000578985 FYNP06241 537 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 GLI1P08151 1106 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 TPM1P09493 284 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 UNGP13051 313 aaPredicted RBP16.09■□□□□ 0.17
IFT20-208ENST00000578985 NCAM1P13591 858 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 ZNF75DP51815 510 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 YWHAZP63104 245 aaKnown RBP16.09■□□□□ 0.17
IFT20-208ENST00000578985 COG7P83436 770 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 SLC6A3Q01959 620 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 TAF5Q15542 800 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 SLC44A4Q53GD3 710 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 BEND5Q7L4P6 421 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 ZNF571Q7Z3V5 609 aaPredicted RBP16.09■□□□□ 0.17
IFT20-208ENST00000578985 WBP2Q969T9 261 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 PIWIL1Q96J94 861 aaKnown RBP16.09■□□□□ 0.17
IFT20-208ENST00000578985 FAM83CQ9BQN1 747 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 NAALADL1Q9UQQ1 740 aa16.09■□□□□ 0.17
IFT20-208ENST00000578985 CAPN9O14815 690 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 SCAMP3O14828 347 aaKnown RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 SERPING1P05155 500 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 HMBSP08397 361 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 ARSAP15289 507 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 MMP8P22894 467 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 NSFP46459 744 aaKnown RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 CENPCQ03188 943 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 TNK2Q07912 1038 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 C2CD6Q53TS8 623 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 IER5LQ5T953 404 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 MMS22LQ6ZRQ5 1243 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 HTR3DQ70Z44 454 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 SLC26A9Q7LBE3 791 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 TMC6Q7Z403 805 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 XYLT1Q86Y38 959 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 PHF13Q86YI8 300 aaPredicted RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 SIX5Q8N196 739 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 C11orf70Q9BRQ4 267 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 LINC00597Q9H2U6 94 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 EBF3Q9H4W6 596 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 POPDC2Q9HBU9 364 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 HPS4Q9NQG7 708 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 TBC1D14Q9P2M4 693 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 SFMBT1Q9UHJ3 866 aa16.08■□□□□ 0.16
IFT20-208ENST00000578985 LSM7Q9UK45 103 aaKnown RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 HBS1LQ9Y450 684 aaKnown RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 BZW2Q9Y6E2 419 aaKnown RBP16.08■□□□□ 0.16
IFT20-208ENST00000578985 KRBA1A5PL33 1030 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 GOLGA8SH3BPF8 625 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 HSF2BPO75031 334 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 GRAP2O75791 330 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 STC2O76061 302 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 SCNN1AP37088 669 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 KPNA1P52294 538 aaPredicted RBP16.07■□□□□ 0.16
IFT20-208ENST00000578985 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
IFT20-208ENST00000578985 EML3Q32P44 896 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 ITPRIPL2Q3MIP1 535 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
IFT20-208ENST00000578985 FAM102AQ5T9C2 384 aaPredicted RBP16.07■□□□□ 0.16
IFT20-208ENST00000578985 SYPL2Q5VXT5 272 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 ACAD10Q6JQN1 1059 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 DEFB106AQ8N104 65 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 OR8K1Q8NGG5 319 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 TTC8Q8TAM2 541 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 DQX1Q8TE96 717 aaKnown RBP16.07■□□□□ 0.16
IFT20-208ENST00000578985 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 SLC2A13Q96QE2 648 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 HEBP1Q9NRV9 189 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 GTSE1Q9NYZ3 720 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
IFT20-208ENST00000578985 MSI1O43347 362 aaKnown RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 GREM1O60565 184 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 DAB1O75553 588 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 CALB1P05937 261 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 HNRNPH3P31942 346 aaKnown RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 RNASE9P60153 205 aaKnown RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 PRKCQQ04759 706 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 RUNX3Q13761 415 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
IFT20-208ENST00000578985 DCAF6Q58WW2 860 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 PPP1R2P3Q6NXS1 205 aa16.06■□□□□ 0.16
IFT20-208ENST00000578985 BBS7Q8IWZ6 715 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms