RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PRRT4C9JH25 899 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 NPC1O15118 1278 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 NCOA4Q13772 614 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 E2F5Q15329 346 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 SCARA5Q6ZMJ2 495 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 CCNI2Q6ZMN8 369 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 TOGARAM2Q6ZUX3 1019 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 GLRX5Q86SX6 157 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 ACOT1Q86TX2 421 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 NELFCDQ8IXH7 590 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 CADM4Q8NFZ8 388 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 USP28Q96RU2 1077 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 KLF16Q9BXK1 252 aaPredicted RBP12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 SLC6A17Q9H1V8 727 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 PRDM16Q9HAZ2 1276 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 CSNK1G1Q9HCP0 422 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 CYLDQ9NQC7 956 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 IGSF10Q6WRI0 2623 aa12.29□□□□□ -0.44
CTDNEP1-212ENST00000576613 GREM1O60565 184 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 EXOC3O60645 756 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 CER1O95813 267 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 TBX18O95935 607 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 FAM200BP0CF97 657 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 NCAM1P13591 858 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 CCDC130P13994 396 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 SYT1P21579 422 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 MAOBP27338 520 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 MAP3K7CLP57077 242 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 CUL4AQ13619 759 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 STK38Q15208 465 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 E2F4Q16254 413 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 KLHDC10Q6PID8 442 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 IL27RAQ6UWB1 636 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 TADA2BQ86TJ2 420 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 PDZD3Q86UT5 571 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZCCHC9Q8N567 271 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 PNPLA1Q8N8W4 532 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 IQUBQ8NA54 791 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZMIZ2Q8NF64 920 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 SETD7Q8WTS6 366 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 DNASE2BQ8WZ79 361 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 BHMTQ93088 406 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 TOE1Q96GM8 510 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 SMOQ99835 787 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 CD93Q9NPY3 652 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 USP36Q9P275 1121 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 TFIP11Q9UBB9 837 aaKnown RBP12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 DNMT3LQ9UJW3 386 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 PCOLCE2Q9UKZ9 415 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 SCML2Q9UQR0 700 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 STON1Q9Y6Q2 735 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 LOC400499M0QZD8 3231 aa12.28□□□□□ -0.44
CTDNEP1-212ENST00000576613 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.44
CTDNEP1-212ENST00000576613 WASH3PC4AMC7 463 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 SYNCRIPO60506 623 aaKnown RBP12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 CBFA2T3O75081 653 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 BEST1O76090 585 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZNF883P0CG24 379 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 OXTRP30559 389 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 MATKP42679 507 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 CASP4P49662 377 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 PGFP49763 221 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 COL28A1Q2UY09 1125 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 FUT11Q495W5 492 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 UNC13DQ70J99 1090 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 UNC93AQ86WB7 457 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 CRYBG2Q8N1P7 616 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 UCMAQ8WVF2 138 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 DHX58Q96C10 678 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 C7orf25Q9BPX7 421 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 GPR174Q9BXC1 333 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 SDCBP2Q9H190 292 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 ITM2CQ9NQX7 267 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 WSB2Q9NYS7 404 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 KIAA1522Q9P206 1035 aaPredicted RBP12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZNF510Q9Y2H8 683 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 SLC27A6Q9Y2P4 619 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 PCDHA5Q9Y5H7 936 aa12.27□□□□□ -0.45
CTDNEP1-212ENST00000576613 LRRIQ3A6PVS8 624 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 BCAT2O15382 392 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CYP26A1O43174 497 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 STX6O43752 255 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 ACADMP11310 421 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 CHKAP35790 457 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 NASPP49321 788 aaPredicted RBP12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 PSEN1P49768 467 aa12.26□□□□□ -0.45
CTDNEP1-212ENST00000576613 TPMTP51580 245 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms