RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 C21orf58P58505 322 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 PLA1AQ53H76 456 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 TREML2Q5T2D2 321 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 DARS2Q6PI48 645 aaKnown RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 RASAL3Q86YV0 1011 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 SLC15A3Q8IY34 581 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 TBC1D5Q92609 795 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 APIPQ96GX9 242 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 LRRC27Q9C0I9 530 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 MS4A7Q9GZW8 240 aaPredicted RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 BHMT2Q9H2M3 363 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 GLOD4Q9HC38 313 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 DLL3Q9NYJ7 618 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 CPNE7Q9UBL6 633 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 MRPS17Q9Y2R5 130 aaKnown RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 WNT6Q9Y6F9 365 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 PARP4Q9UKK3 1724 aaKnown RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 BRWD3Q6RI45 1802 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 RGPD5Q99666 1765 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 A1L4Q6 167 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 H0YIZ8 118 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 MASP2O00187 686 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 RBMXL2O75526 392 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 TJP3O95049 919 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 FAM163BP0C2L3 166 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 EBLN1P0CF75 366 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 PROK1P58294 105 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 KRT17Q04695 432 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 GALEQ14376 348 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 RALBP1Q15311 655 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 CNGA2Q16280 664 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 AARS2Q5JTZ9 985 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 C1orf141Q5JVX7 400 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 DCAF12L1Q5VU92 463 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 SULT6B1Q6IMI4 303 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 ZNF788Q6ZQV5 615 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 CCDC149Q6ZUS6 474 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 FMNL3Q8IVF7 1028 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 RP9Q8TA86 221 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 SOCS4Q8WXH5 440 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 GLG1Q92896 1179 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 PNNQ9H307 717 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 ZSCAN32Q9NX65 697 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 AFF4Q9UHB7 1163 aaKnown RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 GABRQQ9UN88 632 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 AOX1Q06278 1338 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 FRMPD2Q68DX3 1309 aaPredicted RBP4.87□□□□□ -1.63
NUP88-202ENST00000570937 IGSF1Q8N6C5 1336 aa4.87□□□□□ -1.63
NUP88-202ENST00000570937 RGPD1P0DJD0 1748 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 ERVV-2B6SEH9 535 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 CCP110O43303 1012 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 ERBB2P04626 1255 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 BRAFP15056 766 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 RHCEP18577 417 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 KLRC1P26715 233 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 PPP2R1AP30153 589 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 CLCN2P51788 898 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 FMO1Q01740 532 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 RHDQ02161 417 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 DDX10Q13206 875 aaKnown RBP4.86□□□□□ -1.63
NUP88-202ENST00000570937 SEMA5AQ13591 1074 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 KIAA0753Q2KHM9 967 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 CEP85Q6P2H3 762 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 ZNF804AQ7Z570 1209 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 ABRAQ8N0Z2 381 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 MPP5Q8N3R9 675 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 BPIFB1Q8TDL5 484 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 OSCP1Q8WVF1 389 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 SPSB4Q96A44 273 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 VOPP1Q96AW1 172 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 RSPRY1Q96DX4 576 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 MSLNLQ96KJ4 702 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 DUSP22Q9NRW4 184 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 TRMT13Q9NUP7 481 aaKnown RBP4.86□□□□□ -1.63
NUP88-202ENST00000570937 LRRC37A3O60309 1634 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 ANKRD26Q9UPS8 1709 aa4.86□□□□□ -1.63
NUP88-202ENST00000570937 MAP2P11137 1827 aaKnown RBP4.86□□□□□ -1.63
NUP88-202ENST00000570937 WIPF3A6NGB9 483 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PYCARD-AS1I3L0S3 204 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 ZNF213O14771 459 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 MGEA5O60502 916 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 FESP07332 822 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PHKG2P15735 406 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 RPL17P18621 184 aaKnown RBP4.85□□□□□ -1.63
NUP88-202ENST00000570937 PEX2P28328 305 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 ADORA2AP29274 412 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 CYP2C18P33260 490 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 EEFSECP57772 596 aaKnown RBP4.85□□□□□ -1.63
NUP88-202ENST00000570937 INSCQ1MX18 579 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 FCRLBQ6BAA4 426 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 ZNF530Q6P9A1 599 aaPredicted RBP4.85□□□□□ -1.63
NUP88-202ENST00000570937 MTHFD1LQ6UB35 978 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 ZDHHC24Q6UX98 284 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 PARS2Q7L3T8 475 aaKnown RBP4.85□□□□□ -1.63
NUP88-202ENST00000570937 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
NUP88-202ENST00000570937 SESTD1Q86VW0 696 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms