RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GHRP10912 638 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TYRP1P17643 537 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TLX1P31314 330 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 NCAPHQ15003 741 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 STKLD1Q8NE28 680 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ANKS1AQ92625 1134 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 EFHD2Q96C19 240 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 TSNARE1Q96NA8 513 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 MENTQ9BUN1 341 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TDRD1Q9BXT4 1180 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 LRWD1Q9UFC0 647 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CLEC4AQ9UMR7 237 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 PCDHGA1Q9Y5H4 931 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ESYT2A0FGR8 921 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 GOLGA8SH3BPF8 625 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 HDAC3O15379 428 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TLR5O60602 858 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 BAG2O95816 211 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CYBBP04839 570 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 OR1G1P47890 313 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ZNF165P49910 485 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 DRG2P55039 364 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 STAT4Q14765 748 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CRYMQ14894 314 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ZNF174Q15697 407 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 PTCRAQ6ISU1 281 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 TRIM50Q86XT4 487 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CREG2Q8IUH2 290 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 OR8H3Q8N146 312 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 C4orf32Q8N8J7 132 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 VPS16Q9H269 839 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 FOXP1Q9H334 677 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 RSAD1Q9HA92 442 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 PDLIM7Q9NR12 457 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 AGPAT3Q9NRZ7 376 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 BTBD7Q9P203 1132 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 SUCLA2Q9P2R7 463 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 STK38LQ9Y2H1 464 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ZKSCAN5Q9Y2L8 839 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 LRCH1Q9Y2L9 728 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 LAMA2P24043 3122 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 FAM237AA0A1B0GTK4 181 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 SLC34A2O95436 690 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 CXCL14O95715 111 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 LGALS2P05162 132 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 OR52Z1P0C646 297 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 KPNA1P52294 538 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 MAP3K7CLP57077 242 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 SCAND1P57086 179 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 PFKFB3Q16875 520 aaPredicted RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 ATL3Q6DD88 541 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 WDR73Q6P4I2 378 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 MEX3BQ6ZN04 569 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 REPS2Q8NFH8 660 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 ASB12Q8WXK4 309 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 MSANTD3Q96H12 275 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 WNT5BQ9H1J7 359 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 RHBGQ9H310 441 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 RPF1Q9H9Y2 349 aaKnown RBP6.92□□□□□ -1.3
SMG1-217ENST00000569764 PARVGQ9HBI0 331 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 RMND1Q9NWS8 449 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 RGL1Q9NZL6 768 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
SMG1-217ENST00000569764 IGKV6D-41A0A0C4DH26 115 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 A6NLC8 198 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 KPNA5O15131 536 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ACRP10323 421 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 KELP23276 732 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ORC1Q13415 861 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MOXD1Q6UVY6 613 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MYLIPQ8WY64 445 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MRPL4Q9BYD3 311 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 SEMA6BQ9H3T3 888 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 RASSF1Q9NS23 344 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 UBP1Q9NZI7 540 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 IGSF9Q9P2J2 1179 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PYCARDQ9ULZ3 195 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PLAAQ9Y263 795 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 CAPN7Q9Y6W3 813 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MYH7BA7E2Y1 1941 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MAPK13O15264 365 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 CCNT1O60563 726 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 PPP6R2O75170 966 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 MMP3P08254 477 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 TMEM191BP0C7N4 346 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 CSF2RAP15509 400 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 PCP4P48539 62 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ETV1P50549 477 aa6.91□□□□□ -1.3
SMG1-217ENST00000569764 ATXN1P54253 815 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 VCPP55072 806 aaKnown RBP6.91□□□□□ -1.3
SMG1-217ENST00000569764 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms